| Protein: | spb70 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 574 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spb70.
| Description | E-value | Query Range |
Subject Range |
|
|
534.0 | [0..7] | [574..21] |
|
|
532.0 | [0..7] | [574..20] |
|
|
526.0 | [0..7] | [574..17] |
|
|
526.0 | [0..8] | [574..22] |
|
|
522.0 | [0..7] | [574..20] |
|
|
522.0 | [0..7] | [574..20] |
|
|
521.0 | [0..7] | [574..20] |
|
Region A: Residues: [1-217] |
1 11 21 31 41 51
| | | | | |
1 MEFPIDDEEL LDERNKLLQI CNMDEQTMFY KWESWCLQRG NTPKLDLDTF KAFAKDMKFQ 60
61 MERQVKATLK QNPERKSIKQ IPGMNIDSIL GLPVKTTASG DSLMQESKPS TETFELNSSD 120
121 AGRVLEVLNK ELKIVTSKPS APSKLVIVAN FDLKAFNYRI MYQKLYDSSE VLDDRIELFS 180
181 ALTCRKYNIS DEDLANPSEL TQEPVVVVGR IVVESTN
|
| Detection Method: |  |
| Confidence: | 93.823909 |
| Match: | PF08418.1 |
| Description: | No description for PF08418.1 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.307 | 0.245 | DNA primase activity | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.417 | 0.007 | DNA primase activity | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.304 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.299 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.288 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [218-284] |
1 11 21 31 41 51
| | | | | |
1 LGGRLNQNSI LLESSRRLGA GVRVRLKVDD LPSYSIFPGQ IVSVKGSNPS GNMFIAKEIL 60
61 PIPPLPF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [285-574] |
1 11 21 31 41 51
| | | | | |
1 PSSSKQEHAT FVANTNNQPI SIYIASGPWS LRDDLSFSPL KSMISYVNKN PVDLVILCGP 60
61 FLDINHILIR TGNITGTSAT SLEELFKERV TPILSQLTCP CILIPHINDA ASDHPAWPQD 120
121 AFNRVALGLP SNFKCFPNPC MFSINDVVFG VSTNDILLHT SREELFRLPS HGNLFARLVS 180
181 HVLHQRHFYP LFPGGSLEKC NPSNLDIAHL KLGEFLNTMP DILILPSDLR YFVKNVENVV 240
241 SLNPGKATKG INLGTFAKLT IAPLELGDNG SSNHYSHRVW LRTKAEILKL
|
| Detection Method: | |
| Confidence: | 1.52 |
| Match: | 1su1A |
| Description: | Structural and biochemical characterization of Yfce, a phosphoesterase from E. coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.06438091629012 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.87325132707337 | bayes_pls_golite062009 |
| catalytic activity | 1.30037658165549 | bayes_pls_golite062009 |
| protein serine/threonine phosphatase activity | 1.17916462117542 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.950264524479969 | bayes_pls_golite062009 |
| phosphatase activity | 0.829761417192212 | bayes_pls_golite062009 |
| phosphoprotein phosphatase activity | 0.768201004870964 | bayes_pls_golite062009 |
| structural molecule activity | 0.211411396269789 | bayes_pls_golite062009 |
| hydrolase activity | 0.070797330694107 | bayes_pls_golite062009 |
| protein binding | 0.0115800495687428 | bayes_pls_golite062009 |
