| Protein: | DIP1-PB |
| Organism: | Drosophila melanogaster |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIP1-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..1] | [409..1] |
|
Region A: Residues: [1-237] |
1 11 21 31 41 51
| | | | | |
1 MVSVGQRVAF LSTHWTSPLQ NPNATVKPLI QMPLQAANVQ EQQSSPVALY PTSASPVAVQ 60
61 SPQDAFLAVQ SPGAPAPVQL ANSSDQQNNP DADAIASKLP MPVIIKEEPI SVNDEPSVDN 120
121 IEDNTSASTS ASGIGGKIPF KKIFQKRKKS SERTRDKKLR QNRQLRKSML PKNALMALNE 180
181 VKGVTISDFT IDSNTDGGFT AVVTVNSNQY EGKGTSKMTA KNAACEKAWR DFIIAKM
|
| Detection Method: |  |
| Confidence: | 17.69897 |
| Match: | 1qu6A |
| Description: | dsRNA-dependent protein kinase pkr |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94193673826237 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
| RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
| protein binding | 0.32114973384806 | bayes_pls_golite062009 |
|
Region A: Residues: [238-409] |
1 11 21 31 41 51
| | | | | |
1 TPKPPRIHQV EMGSEPMDIN EDEADAPDDD LPMLNLASFA IYKLFAEWER EGYVVPEMHP 60
61 SANAAQQAGG DAGTPVPPVP KEPKKPPVRT ELPSGWETMH PATILCIMRP GLNYVDYGSS 120
121 GDKTNGMQHL GIMVDNQEFH ANGRSKKIAR RNVAVKVCNS LFGTNFTYSD TT
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94193673826237 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04630961873875 | bayes_pls_golite062009 |
| ribonuclease activity | 0.868825189258668 | bayes_pls_golite062009 |
| nuclease activity | 0.810795014450932 | bayes_pls_golite062009 |
| endonuclease activity | 0.808265327042919 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.580369692270212 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 0.540638671994607 | bayes_pls_golite062009 |
| RNA binding | 0.41703783699663 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.323139941667645 | bayes_pls_golite062009 |
| protein binding | 0.32114973384806 | bayes_pls_golite062009 |
