| Protein: | FBpp0311837, run-PA |
| Organism: | Drosophila melanogaster |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311837, run-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..115] | [509..1460] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MHLPAGPTMV ANNTQVLAAA AAAAAAAAAA VAQGPGPQQS SNATTASAIA INPAQSLANT 60
61 STHSASSTGS STPDLSTNNT SSSSNATTSP QNSAKMPSSM TDMFASLHEM LQEY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [115-267] |
1 11 21 31 41 51
| | | | | |
1 HGELAQTGSP SILCSALPNH WRSNKSLPGA FKVIALDDVP DGTLVSIKCG NDENYCGELR 60
61 NCTTTMKNQV AKFNDLRFVG RSGRGKSFTL TITIATYPVQ IASYSKAIKV TVDGPREPRS 120
121 KQSYGYPHPG AFNPFMLNPA WLDAAYMTYG YAD
|
| Detection Method: | |
| Confidence: | 46.154902 |
| Match: | 1e50A |
| Description: | Acute myeloid leukemia 1 protein (AML1), RUNT domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13591399970354 | bayes_pls_golite062009 |
| nucleic acid binding | 0.54158309583174 | bayes_pls_golite062009 |
| DNA binding | 0.53363287856737 | bayes_pls_golite062009 |
| transcription regulator activity | 0.3602964037518 | bayes_pls_golite062009 |
|
Region A: Residues: [268-330] |
1 11 21 31 41 51
| | | | | |
1 YFRHQAAAQA AQVHHPALAK SSASSVSPNP NPSVATSSSS AVQPSEYPHP AAAVAAAAGQ 60
61 PAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [331-510] |
1 11 21 31 41 51
| | | | | |
1 MMPSPPGAAP ATPYAIPQFP FNHVAAAAAA KAATPHAFHP YNFAAAAGLR ARNAALHHQS 60
61 EPVHVSPASS RPSSSSPTQQ HVLLKLNTSI ETSSIHEQSA SDGDSDDEQI DVVKSEFDLD 120
121 KSLDVAPLRM RCDLKAPSAM KPLYHESGPG AVANSRQPSP ETTTKIKSAA VQQKTVWRPY 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
