| Protein: | Pvf1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 325 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pvf1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..29] | [325..18] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MAMSRIRILK PMQHPLLILP VLLLVLIVSE AAAGSLVSPN NRQPSQRFFY AAATSSSSTQ 60
61 TKVRLLRQAD D
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [72-230] |
1 11 21 31 41 51
| | | | | |
1 PSAAPGALEG SCCQGAAAEA GTPLTLPLSV SAELTNVTAD YDVSGEMPSS KENFKRSIMK 60
61 STVRNATPAS CSPQPTIVEL KPPAEDEANY YYMPACTRIS RCNGCCGSTL ISCQPTEVEQ 120
121 VQLRVRKVDR AATSGRRPFT IITVEQHTQC RCDCRTKAE
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 1fzvA |
| Description: | Placenta growth factor-1, PLGF-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| vascular endothelial growth factor receptor binding | 5.53296544131638 | bayes_pls_golite062009 |
| receptor binding | 4.98600168355158 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 2 binding | 4.84894440498579 | bayes_pls_golite062009 |
| growth factor activity | 4.40342630446728 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 1 binding | 3.72494469310902 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 3.60727548920187 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 3.46872954776606 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 3.46872954776606 | bayes_pls_golite062009 |
| cytokine activity | 2.94824371215551 | bayes_pls_golite062009 |
| binding | 2.64101807129423 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 3 binding | 2.49662692173028 | bayes_pls_golite062009 |
| growth factor binding | 2.41942870726502 | bayes_pls_golite062009 |
| protein binding | 2.36794464190805 | bayes_pls_golite062009 |
| cell surface binding | 2.18650685174299 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 1.78479767888975 | bayes_pls_golite062009 |
| type II transforming growth factor beta receptor binding | 1.68851021785811 | bayes_pls_golite062009 |
| pattern binding | 1.42097884493181 | bayes_pls_golite062009 |
| heparin binding | 1.29079171602988 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.20536536478688 | bayes_pls_golite062009 |
| platelet-derived growth factor binding | 1.16893591942376 | bayes_pls_golite062009 |
| hormone activity | 0.94314407550729 | bayes_pls_golite062009 |
| fibronectin binding | 0.81652439411811 | bayes_pls_golite062009 |
| protein dimerization activity | 0.697058311884552 | bayes_pls_golite062009 |
| polysaccharide binding | 0.539968806788969 | bayes_pls_golite062009 |
| protein homodimerization activity | 0.415660572795793 | bayes_pls_golite062009 |
| carbohydrate binding | 0.40503978964895 | bayes_pls_golite062009 |
| neurotrophin receptor binding | 0.35766568682861 | bayes_pls_golite062009 |
| identical protein binding | 0.273591586673912 | bayes_pls_golite062009 |
|
Region A: Residues: [231-325] |
1 11 21 31 41 51
| | | | | |
1 DCNVYQSYRK DLCRCECHNT DARDKCLEQA ENKYWVDDNC TCVCRYNQSC TTGTVFDETQ 60
61 CKCTDPAAPI DVLDRKRFIV QAVQVDPDNT TLYSV
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
