| Protein: | FBpp0309136, mth... |
| Organism: | Drosophila melanogaster |
| Length: | 676 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309136, mth....
| Description | E-value | Query Range |
Subject Range |
|
|
313.0 | [0..102] | [674..557] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MDRSRSSRAA SSNQFIRPCG LLTTVILLQT LVSMSLAIEE MSPPPAAPPR PSPPPTVKLN 60
61 KCCHSGEYLN DGTCIAGSEA LWLPMVYLVQ QQRFFEPHGA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [101-303] |
1 11 21 31 41 51
| | | | | |
1 SPRFLKFLPN TRPTCRKDQT TEIFRSRGAN VMLFPNGTLY VRERALMVQP SDYCVDWEVA 60
61 VVCLNDSQPI NALEDPDYAA NPLVQQEPPK ASLRLSKCCG KWGSYNTQLQ NCDLQPNHQA 120
121 AVDGLLRLSP QLPEGSYQTS YGLPDCGQPG GYSIAGDWQD AKLDRNTAML QLPHKNLSAG 180
181 QYCLEHTQRE GEVKIIACQH LFS
|
| Detection Method: | |
| Confidence: | 29.0 |
| Match: | 2pzxA |
| Description: | No description for 2pzxA was found. |
| Term | Confidence | Notes |
| G-protein coupled receptor activity | 7.48253527316663 | bayes_pls_golite062009 |
| transmembrane receptor activity | 5.76968261800439 | bayes_pls_golite062009 |
| receptor activity | 5.47976284348283 | bayes_pls_golite062009 |
| signal transducer activity | 4.51388461085202 | bayes_pls_golite062009 |
| molecular transducer activity | 4.51388461085202 | bayes_pls_golite062009 |
|
Region A: Residues: [304-676] |
1 11 21 31 41 51
| | | | | |
1 SAAGAGIHDG SIGGTIEQAN GQNLQKAVLT GGILVSIVFL SATLVAGFLL PAVHHALHWR 60
61 CQICYVTCLL FGKILLAIEE LSSSLQPGSA ACHTLAITMQ FFFLAAFFWL NTMCFNIWWT 120
121 FRDFRPSSLE RNQEALRRYL YSLYAWGGPL LITFVAACVD QLPETTLLRP GFGQLYCWFD 180
181 NRNLSIFAYF YGPIGLLLCA NIALFVSTTH QLTCGLWKRD DVKSSSEKSA LGRVCLKLVV 240
241 VMGVTWIADI LSWLVGGPHG VWFFTDLINA LQGVFIFIVV GCQPQVWTAC RRIFCPRLRH 300
301 DITNTTNGVQ HSSSSQGLPS MAGGTEITQN TTTTTTTTNT TATHMPSNPA EDEVPEKAPI 360
361 APVAPIVKME TIC
|
| Detection Method: | |
| Confidence: | 39.045757 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
