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View Structure Prediction Details

Protein: CG12398-PA
Organism: Drosophila melanogaster
Length: 633 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12398-PA.

Description E-value Query
Range
Subject
Range
gi|118780676, gi... - gi|118780676|ref|XP_310332.5| ENSANGP00000024305 [Anopheles gambiae str. PEST], gi|116130972|gb|EAA4...
607.0 [0..1] [626..105]

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Predicted Domain #1
Region A:
Residues: [1-633]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAINTFVAM WRFLLTLGPS AMIILLLNKG ILEQRPDIVD EQHRVRSIHI EDLRESYDFI  60
   61 VIGGGSAGCV LAARLSENPE WSVLLLEAGG DEPLLIDLPQ LYPVFQRSPW DWKYLTEPSD 120
  121 RYCLAMEDQR CFWPRAKVLG GCSSINAMMY IRGNRRDYDQ WAALGNPGWN YDNILHYFRK 180
  181 LEDMRVPGFE HSPYHGHGGP ISVERYRFPS PLLDIFMRAA QQLGMVHPDG DFNGRSQTGF 240
  241 APPHGSLRDG LRCSANKGYI RRSWQRPNLD IVLKAFVERI VIDPQSHRAI GVIFEYGLLK 300
  301 HTVRAKREVI LSAGSLASPQ LLMVSGVGPR DQLEPQGIPV VQHLPGVGGN LQDHISTSGA 360
  361 IYTFDSGQNR HLSFIVPEMM NEQAVEDFVQ GSDSFFYAMP VSEVMGFFST RYQDPRLDWP 420
  421 DVQIFMGSYG YGADGGMIGR RGAAITLDNY AEAFEPVLYQ DSFVIAPLLM RPRSRGYLQL 480
  481 RSADPKVHPL IHANYYDDPH DMAVMVEGLK LAHRLTQTPV MQSLNATMNI YEWRNCPEVE 540
  541 YLSDAFWECL ARFYSQTIYH PVGTCKMAPA SDPAGVVDPR LRVRGMRGLR VIDASIMPTI 600
  601 PTGNTNAPTL MLAERGADII KEDWRHYRDG GWG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.154902
Match: 1gpeA
Description: Glucose oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
choline dehydrogenase activity 4.66965094791663 bayes_pls_golite062009
NADPH-adrenodoxin reductase activity 4.10319574017291 bayes_pls_golite062009
oxidoreductase activity 2.3417445147889 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors 1.47575323060551 bayes_pls_golite062009
oxygen-dependent protoporphyrinogen oxidase activity 1.34149762265767 bayes_pls_golite062009
glucose dehydrogenase activity 1.30840878956762 bayes_pls_golite062009
transporter activity 1.29839290134235 bayes_pls_golite062009
transmembrane transporter activity 1.07862908893913 bayes_pls_golite062009
catalytic activity 1.03127962968326 bayes_pls_golite062009
monooxygenase activity 0.72374980280274 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 0.704326257168965 bayes_pls_golite062009
binding 0.694618787489897 bayes_pls_golite062009
substrate-specific transporter activity 0.556967966402473 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH group of donors 0.442625746935807 bayes_pls_golite062009
protein binding 0.370064403093958 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.31459693204333 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.242456601435627 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.170082356807927 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle