| Protein: | mus101-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1425 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mus101-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
919.0 | [0..1] | [1425..1] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MSISMSMDET ICAYFVNNLK PGDGGVQEAD TLQQFEAARE LLGQQLAETQ IRQIKPSEGY 60
61 PLIAAGNLTK KDVFVLTQFE GEFFEQLQQT RALILGPPCL ITCLRRNEPI PEGSSAIYST 120
121 AMRDLQVSAT GITPQKKEEL SRLINWMGGI YFQSFGHRTT HLISNTIKSS KYEQATLNGV 180
181 PVMHVDWVQY VWDQSRRSQR EG
|
| Detection Method: |  |
| Confidence: | 6.522879 |
| Match: | 2owoA |
| Description: | No description for 2owoA was found. |
|
Region A: Residues: [203-314] |
1 11 21 31 41 51
| | | | | |
1 IMATDPDFDK YRLPIFFGAN ITCSGLDVAR KDQVMRLVND NGGIYHRAFR SQVVDIVITE 60
61 QTKTDTEKYK AAIRYKKDVL LPEWIFDSCN RGYALPTKDY EVRPGKTSST PT
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1oqaA |
| Description: | Solution structure of the BRCT-c domain from human BRCA1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.911539062312394 | bayes_pls_golite062009 |
| protein binding | 0.740170908668509 | bayes_pls_golite062009 |
| catalytic activity | 0.00504703671568302 | bayes_pls_golite062009 |
|
Region A: Residues: [315-483] |
1 11 21 31 41 51
| | | | | |
1 KTTRPGAAPG ADQTHLSDLS RISFVSGSRR MCSDLSTVNE SVSSVGSSSP AKQLLKQATS 60
61 SGRNYQQVLA EIEPRQAKKA GAFLDGCCVY LSGFRSEERE KLNRVLNTGG ATRYDEANEG 120
121 ISHIIVGQLD DAEYRQWQRD GLMGSVHVVR LDWLLESIRA GRVVSELVH
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1wf6A |
| Description: | The third BRCA1 C-terminus (BRCT) domain of Similar to S.pombe rad4+/cut5+ product |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.911539062312394 | bayes_pls_golite062009 |
| protein binding | 0.740170908668509 | bayes_pls_golite062009 |
| catalytic activity | 0.00504703671568302 | bayes_pls_golite062009 |
|
Region A: Residues: [484-610] |
1 11 21 31 41 51
| | | | | |
1 RVSMPQNREP DVASPASKRT LRSMNHSFKQ PTLPIKKKLF DQEPDPVQEQ EHEEPDHTLL 60
61 DQYSQDQGAV AQLPPADVSL LQPAASSTQM DIRQRVSVAN PKPPAEGLQL PDLSASTLSI 120
121 DFDKLDY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [611-709] |
1 11 21 31 41 51
| | | | | |
1 FAGVSVYVHR ECFNEEFFNQ MLTECEAAQG LLVPSSFSDE VDFAIVSFEV AFDVKQLPVK 60
61 ARHVVTELFL ESCMKKNQLL PIEYYHKHVP ATALRQPLK
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1cdzA |
| Description: | DNA-repair protein XRCC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.911539062312394 | bayes_pls_golite062009 |
| protein binding | 0.740170908668509 | bayes_pls_golite062009 |
| catalytic activity | 0.00504703671568302 | bayes_pls_golite062009 |
|
Region A: Residues: [710-875] |
1 11 21 31 41 51
| | | | | |
1 GMTIVVSIYA GLERDFINAT AELLGASVNK TFIKKEKPLL VCPSAEGSKY EGAIKWNYPV 60
61 VTSDWLVQCA RTGQKLPFVG YLVGKSPEDF PISPRLRDSN SRTARRPNES TLVAQPDVTM 120
121 EEAENQPAGS VTPVTAGSPG APELTPLRNK RVSELAGIPG GSALHR
|
| Detection Method: | |
| Confidence: | 4.14 |
| Match: | 2d8mA |
| Description: | No description for 2d8mA was found. |
|
Region A: Residues: [876-1112] |
1 11 21 31 41 51
| | | | | |
1 GSNSTSSPDS PCTPLSQVGA QQYNLDFLEQ FVQRLDTEEG KDCVREIIRE MRENQTPELE 60
61 RIRRQACTPV SRKHQRPAPG IPDFCLTPEF QQRMADDFER RWRLPTMKIK PDTPLAVIRQ 120
121 RVMRITCETL GIEYEESNAK TPTLSESPST VKKKPPTRTT QATKLNFDRS PKTPKLSLGK 180
181 KTPLRVSMGS PRSGTQSPFV PNTQSPIEAA PPRRSDGPTL SEEGQSTINF DKISFEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1113-1205] |
1 11 21 31 41 51
| | | | | |
1 SAVPVLAPDV PTVAPDVKQI TDYLKNCESR RNSLKRSHDN DMDCGESEVQ YVQPFESEGF 60
61 ALGTEDMVDW RDPAEFNAAK RRSSGGSPKM QYA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1206-1425] |
1 11 21 31 41 51
| | | | | |
1 GIPCFSISCG DDDEKRAELI ARITQLGGKV CENLVNYDDS CTHLLCERPN RGEKMLACIA 60
61 AGKWILNIQY IEQSHARGDF LDETLYEWGN PKAINLPTLA PEEEPIAAAV HRWRTELSAC 120
121 GGGAFSDHRV ILSMNERSGA PIRNVLRAGG ACILEPTTPF SKDPVAKSAS HCFVDVKKAP 180
181 LSTQDMEYLH KCGVQVLSQI AINAYLMNGR DADLGKYQLL
|
| Detection Method: | |
| Confidence: | 42.154902 |
| Match: | 1jnxX |
| Description: | Breast cancer associated protein, BRCA1 |
Matching Structure (courtesy of the PDB): |
|
