| Protein: | lz-PA |
| Organism: | Drosophila melanogaster |
| Length: | 826 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lz-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
368.0 | [0..1] | [826..1] |
|
Region A: Residues: [1-219] |
1 11 21 31 41 51
| | | | | |
1 MHLHLLAAEK TPPSPSPNPT PTPSASPSGH TGAAGESQLD LASQTESQLQ LGLPLASGYG 60
61 LGLGLGLGLG LGLGQELVAD HSTTVAPVSV AGPGRLGRSI NGSGGSHHHH HLHHHYSPYH 120
121 HAHPYHPPHP HAPHHHHHHH PPYPYPPAGP HPPAMVTSSS TSPTGNGWSS STGDFKGITA 180
181 VATATGGGVG GATQGATAST GATAAEVLAV SSSASVGSS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [220-396] |
1 11 21 31 41 51
| | | | | |
1 SPTGGASNGT AHSGHSGHTG GHSSSTASNN NNNGASNSNS NNNNAVHQDL LWMERLVQKR 60
61 QQEHPGELVR TSNPYFLCSA LPAHWRSNKT LPMAFKVVAL AEVGDGTYVT IRAGNDENCC 120
121 AELRNFTTQM KNDVAKFNDL RFVGRSGRGK SFTLTITVAT SPPQVATYAK AIKVTVD
|
| Detection Method: | |
| Confidence: | 46.39794 |
| Match: | 1e50A |
| Description: | Acute myeloid leukemia 1 protein (AML1), RUNT domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.13591399970354 | bayes_pls_golite062009 |
| nucleic acid binding | 0.54158309583174 | bayes_pls_golite062009 |
| DNA binding | 0.53363287856737 | bayes_pls_golite062009 |
| transcription regulator activity | 0.3602964037518 | bayes_pls_golite062009 |
|
Region A: Residues: [397-524] |
1 11 21 31 41 51
| | | | | |
1 GPREPRSKTS PTGGPHYRAL GLGQRPYIDG FPSTKALHEL ESLRRSAKVA AVTTAAAAAA 60
61 TAASAANAVA AAAAAVAVTP TGGGGGVAAG GVAGGAGAGL VQQLSSNYSS PNSTINSDCQ 120
121 VYKPNAPH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [525-740] |
1 11 21 31 41 51
| | | | | |
1 IQAAEMMGAG EWTNGSSSSA AAYYHSHAHH PHAHHAHAHL QHQMALPPPP PPPAAAPVSV 60
61 GVGGNGATMG MGMGVGVGMG MNHYGGGYDS ANSLEAGQYA AHLPAVLPEM HGHGFATDPY 120
121 QTAGYGGGNT GGGSASKSEL DYGGSYNQAW SNGYQNYQYG SCLATAQYGP QAAPPPQPPP 180
181 PPPVVLCPQL YSTVNQNQIH LHLHSSEKLE QYLGTA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [741-826] |
1 11 21 31 41 51
| | | | | |
1 TSADHLTIGS LTGSSRSSIE IGQDQYHQQV HHAQQQQQQQ QQQQQVHHPQ QQQVESAGEV 60
61 GGSGAGGVES AREEDVGDLS QVWRPY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
