| Protein: | XRCC1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 614 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XRCC1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
285.0 | [0..64] | [614..704] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MPIALFKSVR EVSSEDAVHV AANLLKENAG KKWRTKAPGE KSAYVVLEFE EPQQITGIDI 60
61 GNEHAAFIEV LVSRTGCQAD DFRELLLSSS FMTPIESKNS SNPNRVRCFS STSLAESALP 120
121 EKWKLLQIVC TQPFNRHVPY GLSFVKVHVV AAAAPKVKSL VPQGVMQFGT FKLREESPDS 180
181 ETDNQVNRFH SWKKQTQ
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1xnaA |
| Description: | N-terminal domain of xrcc1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.385277722045402 | bayes_pls_golite062009 |
| catalytic activity | 0.248020161559829 | bayes_pls_golite062009 |
|
Region A: Residues: [198-284] |
1 11 21 31 41 51
| | | | | |
1 HKSPAISATS TAAAIRDAGS TALRRLSAGK VSSLAASPKT STSPSPVLNA LRSVSPTPLD 60
61 AKPLDRNRAS LLFGDDDEDV KDAEVNA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [285-403] |
1 11 21 31 41 51
| | | | | |
1 KKQRLSKHLE ADKDRRRLEQ EKERESRKKK SSRHSLDKSI SKEDKPPAKE HNSSSREKST 60
61 AKEEKEQLRK EERSHSKEEK SRRKEKSKHD HRSSDTSNSK ESSRPTAQKR HSSPTAVAV
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [404-516] |
1 11 21 31 41 51
| | | | | |
1 TPAKKQKIVD TAIQYRPLNQ LLKGVVLVIS GIQNPDRADL RSKAVALGAK YKADWGSGCT 60
61 HLICAFKNTP KYNQVKGKGK IVTRSWIEKC YELKKYLPWR RYALDTNDIG QPE
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 2d8mA |
| Description: | No description for 2d8mA was found. |
|
Region A: Residues: [517-614] |
1 11 21 31 41 51
| | | | | |
1 SDEELCDEAT RPRRDSSKDD VAMLEDSKLT ALADQNDVEM NPDALSGIDT EDELQRVAEE 60
61 NKTKKAKLRT TVKTKSQDIY EVSTDEEDYL ELKKKQID
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
