| Protein: | Rad23-PB |
| Organism: | Drosophila melanogaster |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rad23-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..1] | [343..72] |
|
Region A: Residues: [1-343] |
1 11 21 31 41 51
| | | | | |
1 MLTRDSSSSN RNQLSVKESN KLTSTDDSKQ SMPCEEANHT NSPSSTNTED SVLSRETRPL 60
61 SSDELIGELA QASLQSRAES NLLMGDEYNQ TVLSMVEMGY PREQVERAMA ASYNNPERAV 120
121 EYLINGIPAE EGTFYNRLNE STNPSLIPSG PQPASATSAE RSTESNSDPF EFLRSQPQFL 180
181 QMRSLIYQNP HLLHAVLQQI GQTNPALLQL ISENQDAFLN MLNQPIDRES ESGATVPPVS 240
241 NARIPSTLDN VDLFSPDLEV ATSAQRSAAG TSAAHQSGSA ADNEDLEQPL GVSTIRLNRQ 300
301 DKDAIERLKA LGFPEALVLQ AYFACEKNEE QAANFLLSSS FDD
|
| Detection Method: |  |
| Confidence: | 38.221849 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| damaged DNA binding | 2.05780812338496 | bayes_pls_golite062009 |
| catalytic activity | 0.628189184116182 | bayes_pls_golite062009 |
| binding | 0.540219151625333 | bayes_pls_golite062009 |
| DNA binding | 0.41234593519802 | bayes_pls_golite062009 |
| nucleic acid binding | 0.40496510677618 | bayes_pls_golite062009 |
| protein binding | 0.186032130230449 | bayes_pls_golite062009 |
