| Protein: | rod-PA |
| Organism: | Drosophila melanogaster |
| Length: | 2089 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rod-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
3017.0 | [0..1] | [2089..1] |
|
Region A: Residues: [1-248] |
1 11 21 31 41 51
| | | | | |
1 MWSNFEASSL EDETISNIFS SRGIFQISSE EEVNKYPDVM ASVQCGKMVI GIDKSLLLLE 60
61 DELVAKCSFL AFGAAIEAIA ISSSGNLIVC GLSDGEVHGV FIKGLLLFSV AVNLEDVSLT 120
121 GGTFRSIHQL DQRFYFTCKN GSIYSLSDID ETCLETLGNM SLNENETIAC EKALLEDVTI 180
181 QRLSKGRSSC SVDCAVLLKR LLTGNISAEN NQDDLEAQPG LVITGDQSTM NFRNAANDVT 240
241 RINLPAQY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [249-359] |
1 11 21 31 41 51
| | | | | |
1 GSLKQIFNLE HYIIALTDSG HLVEICPYTR TVYMCQTTQQ KNLLIEDLLV MECSEDNIEL 60
61 LVLTKSTAEG RFIKIVEYPT LNVKNEVEVP DHAWLVRQPK CAVNLYYLAA K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [360-405] |
1 11 21 31 41 51
| | | | | |
1 EVNQSSIPSV VEMMLVSETD PSDRFKKLIC KGRLEEAEEF GKQFEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [406-503] |
1 11 21 31 41 51
| | | | | |
1 CLQPIYEAKA KRILVELCNS NSQNVDTKFQ DLLQLLSQVE SKAFIKSHRM INLNSRHILE 60
61 RYLHEVKKRL TFEDDEEDML EIDEQLHRLK TLAIIDPY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [504-760] |
1 11 21 31 41 51
| | | | | |
1 ECNTDWQKFI YDNNLVRMVK SLFNTDMPTA CLIWRRHSSS ILPLLNEDEL RTLLGFIPSN 60
61 TKPFNVVQWL RQFIPMVSNT HPSIMPFITD WSIEMTRNLQ YSPHWPDIGL EFCTKILDIF 120
121 EEIQFTYSDV RRQQERNVGK LRDLVNALQD LSVLKTNYNM GFTLDNYMQD SIDATALSIL 180
181 QHVQLDKLQR LVKNFMYPIF QEKGRQPLDV IKQYISQLVA SRLSSSSWLD RAMACIELLH 240
241 NEDSRLECAL SVLQNAP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [761-868] |
1 11 21 31 41 51
| | | | | |
1 VPWPDTLAPL IRLRASTHPL AVKINAEYEI QVIKIMKVKY GWPADSSDIN LELFMMRIVK 60
61 LNLPDMLDDI SALTKAAPEL STSANFNCCY QMARRGQVEM AYEFFKKL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [869-1062] |
1 11 21 31 41 51
| | | | | |
1 NGEKNSKSAK EVVEIMANIL ENSSSASFES DIKVQEHLNV LELFKLFLPH VESVYERRYL 60
61 VIKHRFRLRK FGILLSCSSE LIPLHRRHCL LDEAIERIIE RAQATLNVSA FIASEISELC 120
121 TALGLPKVFG LHRICQRIGC LPLSCALAYH VVSFVDCVPA NAGEFVNLAL ELLVQQIESA 180
181 KGKNQETASS LQLI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1063-1159] |
1 11 21 31 41 51
| | | | | |
1 NENDPLSFYL AYELLTSALL HESSRRHDLV ELIKYIRVAV IHYPLDAIKS HYDGKEQAVN 60
61 EHICRALDGI SVALGETTIN FSCALNGSFD VKTLTVP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1160-1368] |
1 11 21 31 41 51
| | | | | |
1 TTTKKRYSVS MFDEVEVQPI QQQPQKKSVG GRMAIVKFLA RTLLLMVIET EPNNSLLMQV 60
61 RNELPENTKA DVESACADFF LSLEHLTKVK EHDAWYVMSQ YLLDFQKQNC RTKRIINEGF 120
121 ITLQLRRIFR NAMGSKDVNF IELFTMLVVD SEALALLEKL SVEVKTDLQK INFLTLSAMY 180
181 HEHIEDLDSV HMIRTKRLKL FYYLEFCQQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1369-1595] |
1 11 21 31 41 51
| | | | | |
1 DHRIKGKFNA DMDNIEDLLK EFHNKQLDVQ LLERMSKDFG FDYQKILITQ ILSILSAQEL 60
61 RFEVKRDTFG DEELVMLSSA QEMRDMCQPY INEINNVELF TSKLKHFIED INIYFYELYM 120
121 CVINILMYFD SAPKEMEIWM NILHFLRHKM ITRRRNRPGQ VETDTWLKSQ RENGVMPKIS 180
181 RYRLPFKPIV EQPLKDILDS ELNVDNCQSW FPLIQMYTAL KGSKDSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1596-1795] |
1 11 21 31 41 51
| | | | | |
1 QNCDYFCMSA VKNSISEYKS KNDSESWSLH PTNNAFLQSI LRLVEKVNNP NKAFLILYFV 60
61 SNYARDGADQ VEASYECWKF VKEKGHLITD PKSREQVAKV KRRYPIQKTQ HLLYVYGLTD 120
121 EKLLRQVENP TELIQALYHH ELILKSSKVD INALVAEIAK LHDLCLATIQ YRLLQKWLAL 180
181 TMESAGDGTI LEETFMEEQN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1796-1862] |
1 11 21 31 41 51
| | | | | |
1 WPEQANGAES SNSQDASENV NRAFYILSSW PKAEAVKFLV GLIFKGGSVN TSTQLQMYEC 60
61 YSKLNDG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1863-2089] |
1 11 21 31 41 51
| | | | | |
1 SNSFTNTISQ RQFISIKCVH ELKALGYKSN LEKFSDDHCN KIDILKMIWQ RNAQNPLSLE 60
61 VMANICLGFD IHLPQIWNGI LKRMVMFHMV RELNALLDVL SCRPHLLHLD GLAQAWDYVL 120
121 CHPLQNAVEL RSFKQEEVLH KTLLRLQGCP VVHALNLLQF AQLCIVVHRP HMAASLLSFC 180
181 QSSEQRQKIK KMIHSHPVEN LRQQILDLED AGILPVVLNF ALKELNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
