Protein: | rod-PA |
Organism: | Drosophila melanogaster |
Length: | 2089 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rod-PA.
Description | E-value | Query Range |
Subject Range |
|
3017.0 | [0..1] | [2089..1] |
Region A: Residues: [1-248] |
1 11 21 31 41 51 | | | | | | 1 MWSNFEASSL EDETISNIFS SRGIFQISSE EEVNKYPDVM ASVQCGKMVI GIDKSLLLLE 60 61 DELVAKCSFL AFGAAIEAIA ISSSGNLIVC GLSDGEVHGV FIKGLLLFSV AVNLEDVSLT 120 121 GGTFRSIHQL DQRFYFTCKN GSIYSLSDID ETCLETLGNM SLNENETIAC EKALLEDVTI 180 181 QRLSKGRSSC SVDCAVLLKR LLTGNISAEN NQDDLEAQPG LVITGDQSTM NFRNAANDVT 240 241 RINLPAQY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [249-359] |
1 11 21 31 41 51 | | | | | | 1 GSLKQIFNLE HYIIALTDSG HLVEICPYTR TVYMCQTTQQ KNLLIEDLLV MECSEDNIEL 60 61 LVLTKSTAEG RFIKIVEYPT LNVKNEVEVP DHAWLVRQPK CAVNLYYLAA K |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [360-405] |
1 11 21 31 41 51 | | | | | | 1 EVNQSSIPSV VEMMLVSETD PSDRFKKLIC KGRLEEAEEF GKQFEL |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [406-503] |
1 11 21 31 41 51 | | | | | | 1 CLQPIYEAKA KRILVELCNS NSQNVDTKFQ DLLQLLSQVE SKAFIKSHRM INLNSRHILE 60 61 RYLHEVKKRL TFEDDEEDML EIDEQLHRLK TLAIIDPY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [504-760] |
1 11 21 31 41 51 | | | | | | 1 ECNTDWQKFI YDNNLVRMVK SLFNTDMPTA CLIWRRHSSS ILPLLNEDEL RTLLGFIPSN 60 61 TKPFNVVQWL RQFIPMVSNT HPSIMPFITD WSIEMTRNLQ YSPHWPDIGL EFCTKILDIF 120 121 EEIQFTYSDV RRQQERNVGK LRDLVNALQD LSVLKTNYNM GFTLDNYMQD SIDATALSIL 180 181 QHVQLDKLQR LVKNFMYPIF QEKGRQPLDV IKQYISQLVA SRLSSSSWLD RAMACIELLH 240 241 NEDSRLECAL SVLQNAP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [761-868] |
1 11 21 31 41 51 | | | | | | 1 VPWPDTLAPL IRLRASTHPL AVKINAEYEI QVIKIMKVKY GWPADSSDIN LELFMMRIVK 60 61 LNLPDMLDDI SALTKAAPEL STSANFNCCY QMARRGQVEM AYEFFKKL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [869-1062] |
1 11 21 31 41 51 | | | | | | 1 NGEKNSKSAK EVVEIMANIL ENSSSASFES DIKVQEHLNV LELFKLFLPH VESVYERRYL 60 61 VIKHRFRLRK FGILLSCSSE LIPLHRRHCL LDEAIERIIE RAQATLNVSA FIASEISELC 120 121 TALGLPKVFG LHRICQRIGC LPLSCALAYH VVSFVDCVPA NAGEFVNLAL ELLVQQIESA 180 181 KGKNQETASS LQLI |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1063-1159] |
1 11 21 31 41 51 | | | | | | 1 NENDPLSFYL AYELLTSALL HESSRRHDLV ELIKYIRVAV IHYPLDAIKS HYDGKEQAVN 60 61 EHICRALDGI SVALGETTIN FSCALNGSFD VKTLTVP |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1160-1368] |
1 11 21 31 41 51 | | | | | | 1 TTTKKRYSVS MFDEVEVQPI QQQPQKKSVG GRMAIVKFLA RTLLLMVIET EPNNSLLMQV 60 61 RNELPENTKA DVESACADFF LSLEHLTKVK EHDAWYVMSQ YLLDFQKQNC RTKRIINEGF 120 121 ITLQLRRIFR NAMGSKDVNF IELFTMLVVD SEALALLEKL SVEVKTDLQK INFLTLSAMY 180 181 HEHIEDLDSV HMIRTKRLKL FYYLEFCQQ |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1369-1595] |
1 11 21 31 41 51 | | | | | | 1 DHRIKGKFNA DMDNIEDLLK EFHNKQLDVQ LLERMSKDFG FDYQKILITQ ILSILSAQEL 60 61 RFEVKRDTFG DEELVMLSSA QEMRDMCQPY INEINNVELF TSKLKHFIED INIYFYELYM 120 121 CVINILMYFD SAPKEMEIWM NILHFLRHKM ITRRRNRPGQ VETDTWLKSQ RENGVMPKIS 180 181 RYRLPFKPIV EQPLKDILDS ELNVDNCQSW FPLIQMYTAL KGSKDSS |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1596-1795] |
1 11 21 31 41 51 | | | | | | 1 QNCDYFCMSA VKNSISEYKS KNDSESWSLH PTNNAFLQSI LRLVEKVNNP NKAFLILYFV 60 61 SNYARDGADQ VEASYECWKF VKEKGHLITD PKSREQVAKV KRRYPIQKTQ HLLYVYGLTD 120 121 EKLLRQVENP TELIQALYHH ELILKSSKVD INALVAEIAK LHDLCLATIQ YRLLQKWLAL 180 181 TMESAGDGTI LEETFMEEQN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1796-1862] |
1 11 21 31 41 51 | | | | | | 1 WPEQANGAES SNSQDASENV NRAFYILSSW PKAEAVKFLV GLIFKGGSVN TSTQLQMYEC 60 61 YSKLNDG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [1863-2089] |
1 11 21 31 41 51 | | | | | | 1 SNSFTNTISQ RQFISIKCVH ELKALGYKSN LEKFSDDHCN KIDILKMIWQ RNAQNPLSLE 60 61 VMANICLGFD IHLPQIWNGI LKRMVMFHMV RELNALLDVL SCRPHLLHLD GLAQAWDYVL 120 121 CHPLQNAVEL RSFKQEEVLH KTLLRLQGCP VVHALNLLQF AQLCIVVHRP HMAASLLSFC 180 181 QSSEQRQKIK KMIHSHPVEN LRQQILDLED AGILPVVLNF ALKELNL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.