| Protein: | chp-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for chp-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
664.0 | [0..1] | [1298..1] |
|
Region A: Residues: [1-359] |
1 11 21 31 41 51
| | | | | |
1 MGLEFFFKFG YAFLTITLMI MIWMSLARAS MFDREMEETH YPPCTYNVMC TCSKSSTDLG 60
61 IVHCKNVPFP ALPRMVNQSK VFMLHMENTG LREIEPYFLQ STGMYRLKIS GNHLTEIPDD 120
121 AFTGLERSLW ELILPQNDLV EIPSKSLRHL QKLRHLDLGY NHITHIQHDS FRGLEDSLQT 180
181 LILRENCISQ LMSHSFSGLL ILETLDLSGN NLFEIDPNVF VDGMPRLTRL LLTDNILSEI 240
241 PYDALGPLKS LRTLDISHNV IWSLSGNETY EIKASTKLNL DNLHLEYNHI EVLPPNSFKY 300
301 FDTVNRTFFD GNPIHTLRED AFKPARIREI YMRYCGLTNI SPVAFDSLVN SLQILDLSG
|
| Detection Method: |  |
| Confidence: | 30.0 |
| Match: | 2omvA |
| Description: | No description for 2omvA was found. |
| Term | Confidence | Notes |
| extracellular matrix structural constituent | 4.44612590443184 | bayes_pls_golite062009 |
| receptor activity | 3.26307298864411 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.15814977487775 | bayes_pls_golite062009 |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.0521926599024 | bayes_pls_golite062009 |
| receptor binding | 1.66628371061052 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.28988458709664 | bayes_pls_golite062009 |
| binding | 1.23313855731605 | bayes_pls_golite062009 |
| extracellular matrix binding | 0.907118880836251 | bayes_pls_golite062009 |
| pattern binding | 0.85554194405707 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.816936488882952 | bayes_pls_golite062009 |
| insulin-like growth factor binding | 0.72018950361604 | bayes_pls_golite062009 |
| nucleic acid binding | 0.710443686489925 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
| polysaccharide binding | 0.34063289254939 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
| collagen binding | 0.085405748322021 | bayes_pls_golite062009 |
| growth factor binding | 0.0358215683345522 | bayes_pls_golite062009 |
|
Region A: Residues: [360-419] |
1 11 21 31 41 51
| | | | | |
1 NNLTKLHHKL FNNFDVLRVI SMRDNKIKIQ KPTETFNAVH YTLLKLDLSG DRNDPTNLQT 60
61
|
| Detection Method: | |
| Confidence: | 22.154902 |
| Match: | 2v9sA |
| Description: | No description for 2v9sA was found. |
|
Region A: Residues: [420-499] |
1 11 21 31 41 51
| | | | | |
1 LRNMTRMRNM RSLSISRLGS SSVGPEDFKD FGVELEDLQI TRASLSGIQS HAFKHVRGLK 60
61 RLDFSENGIS SIENDAFHEI
|
| Detection Method: | |
| Confidence: | 2.78 |
| Match: | 2z66A |
| Description: | No description for 2z66A was found. |
|
Region A: Residues: [500-646] |
1 11 21 31 41 51
| | | | | |
1 GHSLISLKMS HGYSGSALPA EPLRHLTSLQ ELDFSNNHIS SMSDTSFHFL KNLRLLELHD 60
61 NRIEQVLKGT FQGDIHSKLE EISLRFNHLT SISQHTFFDL EALRKLHLDD NKIDKIERRA 120
121 FMNLDELEYL SLRGNKINNL ADESFQN
|
| Detection Method: | |
| Confidence: | 41.0 |
| Match: | 2id5A |
| Description: | No description for 2id5A was found. |
|
Region A: Residues: [647-1315] |
1 11 21 31 41 51
| | | | | |
1 LPKLEILDMA FNQLPNFNFD YFDQVGTLSN LNVNVSHNQI RQLMYNSSWS GRNEHGGMYH 60
61 SNIKILDLSH NNISIIHPGY FRPAEISLTH LHLGYNSLMN TTRDVFGNMP HLQWLDLSYN 120
121 WIHELDFDAF KNTKQLQLVF FGHNYLSDIP QDIFKPVQGL RIVDFSHNHL RGLPDNLFYN 180
181 GGMEKLDVSH NMMLKIPSSS LSSLAALTLC ELHLSNNFIS TIHSMDLSNK FRSLRYLDIS 240
241 YNYLLRIDDA VFATMPKLAV LDLSHNRDLK VMDKSFMGLE NSLIKLGLEN ISLSTVPEIR 300
301 LKYLREFRLG YNELPSIPQE LAHNMSNLRM LDLSNNDLTN VPLMTQALPH LRRLMLSGNP 360
361 ITSLNNNSFD GVNEDLEMLD ISNFRLHYFE YGCLDSLPHL RSLKLTAYSH LEHFNIPHLL 420
421 RHHYNIRQLW IEAPQPFTRI VKKGSGPTQE MQTLQLGNPT DLQREMEGHL PSKLTNITFS 480
481 GPQFTNLNER ILRGMRSPYL YMQLFNTSLQ ALPPNFFKYM GRVRNISLDI RYHNRNLKKI 540
541 PNPNTGAVPY LPNSVFLTDL KMSHTDLNCD CDLGWVEFWQ RKRRQYICSS QTWTDTVFRT 600
601 FMNSPCQVYG RHNCDEHDDD LRETRCENKG GQQLMEALKF DLECGWDNAN CREAAFVVVM 660
661 VCVAMVFWM
|
| Detection Method: | |
| Confidence: | 51.30103 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
