| Protein: | FBpp0306575, 5-H... |
| Organism: | Drosophila melanogaster |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306575, 5-H....
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..1] | [564..1] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MALSGQDWRR HQSHRQHRNH RTQGNHQKLI STATLTLFVL FLSSWIAYAA GKATVPAPLV 60
61 EGETESATSQ DFNSSSAFLG AIASASSTGS GSGSGSGSGS GSGSGSYGLA SMNSSPIAIV 120
121 SYQGITS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [128-438] |
1 11 21 31 41 51
| | | | | |
1 SNLGDSNTTL VPLSDTPLLL EEFAAGEFVL PPLTSIFVSI VLLIVILGTV VGNVLVCIAV 60
61 CMVRKLRRPC NYLLVSLALS DLCVALLVMP MALLYEVLEK WNFGPLLCDI WVSFDVLCCT 120
121 ASILNLCAIS VDRYLAITKP LEYGVKRTPR RMMLCVGIVW LAAACISLPP LLILGNEHED 180
181 EEGQPICTVC QNFAYQIYAT LGSFYIPLSV MLFVYYQIFR AARRIVLEEK RAQTHLQQAL 240
241 NGTGSPSAPQ APPLGHTELA SSGNGQRHSS VGNTSLTYST CGGLSSGGGA LAGHGSGGGV 300
301 SGSTGLLGSP H
|
| Detection Method: | |
| Confidence: | 34.154902 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [439-564] |
1 11 21 31 41 51
| | | | | |
1 HKKLRFQLAK EKKASTTLGI IMSAFTVCWL PFFILALIRP FETMHVPASL SSLFLWLGYA 60
61 NSLLNPIIYA TLNRDFRKPF QEILYFRCSS LNTMMRENYY QDQYGEPPSQ RVMLGDERHG 120
121 ARESFL
|
| Detection Method: | |
| Confidence: | 5.05 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
