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View Structure Prediction Details

Protein: CG11899-PA
Organism: Drosophila melanogaster
Length: 364 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11899-PA.

Description E-value Query
Range
Subject
Range
gi|86605110, gi|... - gi|86605110|ref|YP_473873.1| SufS family cysteine desulfurase [Synechococcus sp. JA-3-3Ab], gi|86553...
gi|86605110 - gi|86605110|ref|YP_473873.1| cysteine desulfurase, SufS family [Cyanobacteria bacterium Yellowstone ...
297.0 [0..1] [363..41]

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Predicted Domain #1
Region A:
Residues: [1-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVINFAAGPA KLPEEVLKEV QENLVNCNGS GISVMEMSHR SSNYAKIHDA TISDLRELLN  60
   61 VPSNYKILLM QGGGTGQFAA VALNLIGKTG TADYVITGSW SAKAAKEAAQ YGTVNAVLPK 120
  121 LAKYTTVPRQ ETWKLDPNAS YVYYCDNETV EGVEFDFVPE VPAGVPLVAD MSSNFLSRPF 180
  181 DVSKFGVIYA GAQKNIGPAG TTVIIVRDDL IGKHLKITPS ILNFEQMDKN NSLLNTPPTF 240
  241 GIYVMGLVFK WIKRNGGVAG MAKLAAAKSK LIYDTINQSN GFYYCPVDVN VRSRMNVPFR 300
  301 IGSASGDDAL EKEFLSKAEA EGMIQLKGHR SVGGIRASLY NAVTLAETQQ LANLMLAFYK 360
  361 NNKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 1bjnA
Description: Phosphoserine aminotransferase, PSAT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.29878871754893 bayes_pls_golite062009
O-phospho-L-serine:2-oxoglutarate aminotransferase activity 2.1692959843619 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 1.80372125032222 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 1.80372125032222 bayes_pls_golite062009
transferase activity 1.44093490824786 bayes_pls_golite062009
5-aminolevulinate synthase activity 1.42214433786345 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity 0.81652984148807 bayes_pls_golite062009
transcription regulator activity 0.636782746250952 bayes_pls_golite062009
nucleic acid binding 0.526698053525422 bayes_pls_golite062009
DNA binding 0.516618701017633 bayes_pls_golite062009
binding 0.450641761940864 bayes_pls_golite062009
structural molecule activity 0.347975812448725 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 0.271623203801431 bayes_pls_golite062009
transcription factor activity 0.188693175079415 bayes_pls_golite062009
pyridoxal phosphate binding 0.16957228630576 bayes_pls_golite062009
vitamin B6 binding 0.16957228630576 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle