| Protein: | Vha100-1-PF, Vha... |
| Organism: | Drosophila melanogaster |
| Length: | 833 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vha100-1-PF, Vha....
| Description | E-value | Query Range |
Subject Range |
|
|
799.0 | [0..1] | [830..1] |
|
Region A: Residues: [1-478] |
1 11 21 31 41 51
| | | | | |
1 MGSLFRSEEM ALCQLFLQSE AAYACVSELG ELGLVQFRDL NPDVNAFQRK FVNEVRRCDE 60
61 MERKLRYLEK EIKKDGIPML DTGESPEAPQ PREMIDLEAT FEKLENELRE VNQNAEALKR 120
121 NFLELTELKH ILRKTQVFFD EMADNQNEDE QAQLLGEEGV RASQPGQNLK LGFVAGVILR 180
181 ERLPAFERML WRACRGNVFL RQAMIETPLE DPTNGDQVHK SVFIIFFQGD QLKTRVKKIC 240
241 EGFRATLYPC PEAPADRREM AMGVMTRIED LNTVLGQTQD HRHRVLVAAA KNLKNWFVKV 300
301 RKIKAIYHTL NLFNLDVTQK CLIAECWVPL LDIETIQLAL RRGTERSGSS VPPILNRMQT 360
361 FENPPTYNRT NKFTKAFQAL IDAYGVASYR EMNPAPYTII TFPFLFAVMF GDLGHGAIMA 420
421 LFGLWMIRKE KGLAAQKTDN EIWNIFFGGR YIIFLMGVFS MYTGLIYNDI FSKSLNIF
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 1ciiA |
| Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [479-701] |
1 11 21 31 41 51
| | | | | |
1 GSHWHLSYNK STVMENKFLQ LSPKGDYEGA PYPFGMDPIW QVAGANKIIF HNAYKMKISI 60
61 IFGVIHMIFG VVMSWHNHTY FRNRISLLYE FIPQLVFLLL LFFYMVLLMF IKWIKFAATN 120
121 DKPYSEACAP SILITFIDMV LFNTPKPPPE NCETYMFMGQ HFIQVLFVLV AVGCIPVMLL 180
181 AKPLLIMQAR KQANVQPIAG ATSDAEAGGV SNSGSHGGGG GHE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [702-833] |
1 11 21 31 41 51
| | | | | |
1 EEEELSEIFI HQSIHTIEYV LGSVSHTASY LRLWALSLAH AQLAEVLWTM VLSIGLKQEG 60
61 PVGGIVLTCV FAFWAILTVG ILVLMEGLSA FLHTLRLHWV EFQSKFYKGQ GYAFQPFSFD 120
121 AIIENGAAAA EE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
