Protein: | Vha100-1-PF, Vha... |
Organism: | Drosophila melanogaster |
Length: | 833 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vha100-1-PF, Vha....
Description | E-value | Query Range |
Subject Range |
|
799.0 | [0..1] | [830..1] |
Region A: Residues: [1-478] |
1 11 21 31 41 51 | | | | | | 1 MGSLFRSEEM ALCQLFLQSE AAYACVSELG ELGLVQFRDL NPDVNAFQRK FVNEVRRCDE 60 61 MERKLRYLEK EIKKDGIPML DTGESPEAPQ PREMIDLEAT FEKLENELRE VNQNAEALKR 120 121 NFLELTELKH ILRKTQVFFD EMADNQNEDE QAQLLGEEGV RASQPGQNLK LGFVAGVILR 180 181 ERLPAFERML WRACRGNVFL RQAMIETPLE DPTNGDQVHK SVFIIFFQGD QLKTRVKKIC 240 241 EGFRATLYPC PEAPADRREM AMGVMTRIED LNTVLGQTQD HRHRVLVAAA KNLKNWFVKV 300 301 RKIKAIYHTL NLFNLDVTQK CLIAECWVPL LDIETIQLAL RRGTERSGSS VPPILNRMQT 360 361 FENPPTYNRT NKFTKAFQAL IDAYGVASYR EMNPAPYTII TFPFLFAVMF GDLGHGAIMA 420 421 LFGLWMIRKE KGLAAQKTDN EIWNIFFGGR YIIFLMGVFS MYTGLIYNDI FSKSLNIF |
Detection Method: | |
Confidence: | 7.0 |
Match: | 1ciiA |
Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [479-701] |
1 11 21 31 41 51 | | | | | | 1 GSHWHLSYNK STVMENKFLQ LSPKGDYEGA PYPFGMDPIW QVAGANKIIF HNAYKMKISI 60 61 IFGVIHMIFG VVMSWHNHTY FRNRISLLYE FIPQLVFLLL LFFYMVLLMF IKWIKFAATN 120 121 DKPYSEACAP SILITFIDMV LFNTPKPPPE NCETYMFMGQ HFIQVLFVLV AVGCIPVMLL 180 181 AKPLLIMQAR KQANVQPIAG ATSDAEAGGV SNSGSHGGGG GHE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [702-833] |
1 11 21 31 41 51 | | | | | | 1 EEEELSEIFI HQSIHTIEYV LGSVSHTASY LRLWALSLAH AQLAEVLWTM VLSIGLKQEG 60 61 PVGGIVLTCV FAFWAILTVG ILVLMEGLSA FLHTLRLHWV EFQSKFYKGQ GYAFQPFSFD 120 121 AIIENGAAAA EE |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.