| Protein: | FBpp0088624, FBp... |
| Organism: | Drosophila melanogaster |
| Length: | 965 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0088624, FBp....
| Description | E-value | Query Range |
Subject Range |
|
|
650.0 | [0..1] | [965..439] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MGTHYFGNVP AAYIELDANS IKEAIKKQVE YYFSVDNLTG DFFLRRKMDP EGYIPVTLIA 60
61 SFHRVLALTT DVAVIVNAIK ESDKLELFEG YKVR
|
| Detection Method: |  |
| Confidence: | 24.0 |
| Match: | 2cqkA |
| Description: | Solution structure of the La domain of c-Mpl binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [95-190] |
1 11 21 31 41 51
| | | | | |
1 TKTTPTTWPI TEVPEVNEGE PKAIGTLEQE QLEQNDGQEK LEEQTEADSP PPILTSAMAT 60
61 KPLNSIPPPP MPRNPQNLVP KMLQDKQQSR SSTIAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [191-381] |
1 11 21 31 41 51
| | | | | |
1 LNSVNAISAL TQQVEGGAAE LAGHLSGLAE SVKPKSTSTP DKRNAASAGN GAGSAAALVA 60
61 EPEGIWKEVK RRSKTNAIKE NATTPPQQQQ PPLSQTLNNN NDNVKTNNTS SKSKSSSNNA 120
121 PSNASSSATV CVTTNNASSA TKATTKTTTT STATTTTNNN IKSGNAAYSK THSKSSSKTA 180
181 APPSAQCHAE K
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [382-529] |
1 11 21 31 41 51
| | | | | |
1 EELDFQFDEE LMDPLPPGTG RINNFTENFS DDDESDYEFA DRDINKLLIV AQVGRAPKHE 60
61 GYDRTADFTS RTKITQDLEN IINDGLVNYE EDLWTTTNVV ADYKTVNVIS QADFEKLAGG 120
121 RNKSVLPPQV VPPPPPFEED LDETLVGD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [530-645] |
1 11 21 31 41 51
| | | | | |
1 TTLNSTLNNT LKSRRARFYA APNSHSIDPR TPRKRKLRHT ANPPVEAHVG WLLDTVEHRP 60
61 RTTSMGSSAG TSPTASSYGS FGSSVPQSLP VFQHPSHALL KENNFTQQAY HKYHSR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [646-831] |
1 11 21 31 41 51
| | | | | |
1 CLKERRRLGY GQSQEMNTLY RFWSFFLREN FNKSMYNEFR SLALEDAGNG FRYGLECLFR 60
61 FFSYGLEKKF RPNIYQDFQD ETIADYETGQ LYGLEKFWAF LKYYKNGEKL EVQPKLAEYL 120
121 KSFKNIEDFR VVEPEINEML QGVGSLNPGR QLNRHRSVSE SDGTAVIAAG GRRLNTTITN 180
181 RSDYVG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [832-965] |
1 11 21 31 41 51
| | | | | |
1 RLLQQQHQQQ QQQQHHQYQQ GYGGYNQQQN RRRTGSFGST TVRIRSGSLG NKPQVANRNQ 60
61 GSQHELRRGG SNSGLAPHKR QQQQKPKPGA GSQTGSTRAT TSAAATATTA ASAATSTAAT 120
121 PAVTVSSGSS SSKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
