| Protein: | BM-40-SPARC-PA, ... |
| Organism: | Drosophila melanogaster |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BM-40-SPARC-PA, ....
| Description | E-value | Query Range |
Subject Range |
|
|
145.0 | [0..29] | [302..396] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MRSLWLLLGL GLLAVSHVQA STEFSEDLLD EDLDLSDIDE NEEEFLRLLE EKNKIKDIER 60
61 ENEIATKLAE VQHNLL
|
| Detection Method: |  |
| Confidence: | 5.154902 |
| Match: | 1tozA |
| Description: | NMR structure of the human NOTCH-1 ligand binding region |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [77-304] |
1 11 21 31 41 51
| | | | | |
1 NPVVEVDLCE TMSCGAGRIC QMHDEKPKCV CIPECPEEVD TRRLVCTNTN ETWPSDCSVY 60
61 QQRCWCDSGE PGCTNPDNAH MHIDYYGACH EPRSCEGEDL KDFPRRMRDW LFNVMRDLAE 120
121 RDELTEHYMQ MELEAETNNS RRWSNAAVWK WCDLDGDTDR SVSRHELFPI RAPLVSLEHC 180
181 IAPFLESCDS NKDHRITLVE WGACLELDPE DLKERCDDVQ RAQPHLLG
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 1nubA |
| Description: | C-terminal (EC) domain of BM-40/SPARC/osteonectin; Domain of BM-40/SPARC/osteonectin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 3.70076684537777 | bayes_pls_golite062009 |
| growth factor activity | 2.98754787930869 | bayes_pls_golite062009 |
| polysaccharide binding | 1.95292425479529 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.69932456942774 | bayes_pls_golite062009 |
| heparin binding | 1.31822233987881 | bayes_pls_golite062009 |
| carbohydrate binding | 1.17408158237797 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.99490013107685 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.6530199085873 | bayes_pls_golite062009 |
| pattern binding | 0.59201056851242 | bayes_pls_golite062009 |
| binding | 0.579955062442584 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.419873715675914 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 0.36654473042467 | bayes_pls_golite062009 |
| protein binding | 0.351109672530073 | bayes_pls_golite062009 |
| endopeptidase inhibitor activity | 0.135824207842184 | bayes_pls_golite062009 |
| enzyme inhibitor activity | 0.0195598784999702 | bayes_pls_golite062009 |
