| Protein: | FBpp0303188, Tl-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1097 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0303188, Tl-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
648.0 | [0..74] | [1097..5] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MSRLKAASEL ALLVIILQLL QWPGSEASFG RDACSEMSID GLCQCAPIMS EYEIICPANA 60
61 ENPTFRLTIQ PKDYVQIMCN LTDTTDYQQL PKKLRIGEVD RVQMRRCMLP GHTPIASILD 120
121 YLGIVSPTTL IFESDNLGMN ITRQHLDRLH G
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 2o6qA |
| Description: | No description for 2o6qA was found. |
|
Region A: Residues: [152-846] |
1 11 21 31 41 51
| | | | | |
1 LKRFRFTTRR LTHIPANLLT DMRNLSHLEL RANIEEMPSH LFDDLENLES IEFGSNKLRQ 60
61 MPRGIFGKMP KLKQLNLWSN QLHNLTKHDF EGATSVLGID IHDNGIEQLP HDVFAHLTNV 120
121 TDINLSANLF RSLPQGLFDH NKHLNEVRLM NNRVPLATLP SRLFANQPEL QILRLRAELQ 180
181 SLPGDLFEHS TQITNISLGD NLLKTLPATL LEHQVNLLSL DLSNNRLTHL PDSLFAHTTN 240
241 LTDLRLEDNL LTGISGDIFS NLGNLVTLVM SRNRLRTIDS RAFVSTNGLR HLHLDHNDID 300
301 LQQPLLDIML QTQINSPFGY MHGLLTLNLR NNSIIFVYND WKNTMLQLRE LDLSYNNISS 360
361 LGYEDLAFLS QNRLHVNMTH NKIRRIALPE DVHLGEGYNN NLVHVDLNDN PLVCDCTILW 420
421 FIQLVRGVHK PQYSRQFKLR TDRLVCSQPN VLEGTPVRQI EPQTLICPLD FSDDPRERKC 480
481 PRGCNCHVRT YDKALVINCH SGNLTHVPRL PNLHKNMQLM ELHLENNTLL RLPSANTPGY 540
541 ESVTSLHLAG NNLTSIDVDQ LPTNLTHLDI SWNHLQMLNA TVLGFLNRTM KWRSVKLSGN 600
601 PWMCDCTAKP LLLFTQDNFE RIGDRNEMMC VNAEMPTRMV ELSTNDICPA EKGVFIALAV 660
661 VIALTGLLAG FTAALYYKFQ TEIKIWLYAH NLLLW
|
| Detection Method: | |
| Confidence: | 67.69897 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [847-1005] |
1 11 21 31 41 51
| | | | | |
1 FVTEEDLDKD KKFDAFISYS HKDQSFIEDY LVPQLEHGPQ KFQLCVHERD WLVGGHIPEN 60
61 IMRSVADSRR TIIVLSQNFI KSEWARLEFR AAHRSALNEG RSRIIVIIYS DIGDVEKLDE 120
121 ELKAYLKMNT YLKWGDPWFW DKLRFALPHR RPVGNIGNG
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 1fywA |
| Description: | Toll-like receptor 2, TLR2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 4.09933951703109 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.9640091493609 | bayes_pls_golite062009 |
| signal transducer activity | 3.16173995936925 | bayes_pls_golite062009 |
| molecular transducer activity | 3.16173995936925 | bayes_pls_golite062009 |
| binding | 2.31499720771829 | bayes_pls_golite062009 |
| nucleic acid binding | 2.15703057436966 | bayes_pls_golite062009 |
| protein binding | 2.10005190551596 | bayes_pls_golite062009 |
| peptidoglycan binding | 1.415118707351 | bayes_pls_golite062009 |
| lipopolysaccharide binding | 1.34678160601175 | bayes_pls_golite062009 |
| RNA binding | 1.00206771839286 | bayes_pls_golite062009 |
| 0.778638092955701 | bayes_pls_golite062009 | |
| receptor binding | 0.656744722545366 | bayes_pls_golite062009 |
| DNA binding | 0.447168637241888 | bayes_pls_golite062009 |
| 0.023695617862085 | bayes_pls_golite062009 |
|
Region A: Residues: [1006-1097] |
1 11 21 31 41 51
| | | | | |
1 ALIKTALKGS TDDKLELIKP SPVTPPLTTP PAEATKNPLV AQLNGVTPHQ AIMIANGKNG 60
61 LTNLYTPNGK SHGNGHINGA FIINTNAKQS DV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
