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View Structure Prediction Details

Protein: FBpp0306892, Orc...
Organism: Drosophila melanogaster
Length: 567 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306892, Orc....

Description E-value Query
Range
Subject
Range
gi|16769888 - gi|16769888|gb|AAL29163.1| SD08136p [Drosophila melanogaster]
347.0 [0..1] [567..1]

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Predicted Domain #1
Region A:
Residues: [1-567]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYDEAIIHL GDFGRYQKII YFLICLTSIP VAFHKLAGVF LLAKPDFRCA LPFENGSSYD  60
   61 LPTHLWNLSY PENERCSYYD VDYTEEYLNG SIPRSSNETK TCSSYVYDRS KYLNSAVTEW 120
  121 NLVCGRDFMA ATSDSLFMLG VLLGSIVFGQ LSDKYGRKPI LFASLVIQVL FGVLAGVAPE 180
  181 YFTYTFARLM VGATTSGVFL VAYVVAMEMV GPDKRLYAGI FVMMFFSVGF MLTAVFAYFV 240
  241 HDWRWLQIAL TLPGLIFMFY YWIIPESARW LLLKGRKDCA IANMQKAARF NKVEISDEAL 300
  301 SELLDEGENS EEKAKQKLED QELDEGPPPS VWDLFCYPNL RRKTLLIFLD WLVTSGVYYG 360
  361 LSWNTSNLGG NVLLNFVISG AVEIPAYIFL LLTLNRWGRR SILCGCLVMA GLSLLATVII 420
  421 PQRMHTLIVA CAMLGKLAIT ASYGTVYIFS AEQFPTVVRN VALGAASMVA RISGMMAPFL 480
  481 NFLATIWKPL PLLICGSLTL VAGLLSLLLP ETHNKPMLET IADGERFGKK TKADVYLETG 540
  541 QELRAPEAQP LKGSGETNGS TIANGHK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
substrate-specific transmembrane transporter activity 5.46247398538901 bayes_pls_golite062009
ion transmembrane transporter activity 4.58978526526921 bayes_pls_golite062009
cation transmembrane transporter activity 4.31967711223954 bayes_pls_golite062009
transporter activity 4.09176719149278 bayes_pls_golite062009
anion transmembrane transporter activity 3.94605227012838 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
organic anion transmembrane transporter activity 3.3413526350788 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 2.52916479889426 bayes_pls_golite062009
hexose phosphate transmembrane transporter activity 2.39244854801368 bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity 2.39244854801368 bayes_pls_golite062009
organic acid transmembrane transporter activity 2.15783210522667 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
binding 1.46605775041083 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
polyol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
alcohol transmembrane transporter activity 0.924836669821548 bayes_pls_golite062009
glycerol transmembrane transporter activity 0.812001619402678 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009
phosphate transmembrane transporter activity 0.312628600969375 bayes_pls_golite062009
cation:sugar symporter activity 0.143419068761182 bayes_pls_golite062009
sugar:hydrogen symporter activity 0.143419068761182 bayes_pls_golite062009

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