| Protein: | Pli-PB, Pli-PA |
| Organism: | Drosophila melanogaster |
| Length: | 424 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pli-PB, Pli-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
834.0 | [0..12] | [424..1] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MVKRTDGTES PILAEDGGDG HDKPRLRYGE LVILGYNGYL PQGDRGRRRS KFVLHKRTEA 60
61 SGVKRSKHYI VQSPQTSKAI LDANQHSISY TLSRNQAVIV EYKEDTETDM FQVGRSSESP 120
121 IDFVVMDTLP GDKKDAKVMQ STISRFACRI LVNRCEPAKA RIFAAGFDSS RNIFLGEKAT 180
181 KWQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [184-236] |
1 11 21 31 41 51
| | | | | |
1 DNVEIDGLTT NGVLIMHPKG SFCGGNAKCG LWRECSVGGD VFSLRESRSA QQK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [237-333] |
1 11 21 31 41 51
| | | | | |
1 GQPIYDECNI LQDGTLIDLC GATLLWRSAE GLQHSPTKHD LEKLIDAINA GRPQCPVGLN 60
61 TLVIPRKVNI GDQVNQPYVY LNCGHVQGHH DWGQDEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [334-424] |
1 11 21 31 41 51
| | | | | |
1 TGARRCPMCL ELGPVVTLCM GLEPAFYVDV GAPTYAFNPC GHMATEKTVK YWANVEIPHG 60
61 TNGFQAVCPF CATPLDGATG YIKLIFQDNL D
|
| Detection Method: | |
| Confidence: | 1.18 |
| Match: | 1e4uA |
| Description: | Not-4 N-terminal RING finger domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.06923986676721 | bayes_pls_golite062009 |
| protein binding | 1.48593945455888 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.324292450240439 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.248014157054608 | bayes_pls_golite062009 |
