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View Structure Prediction Details

Protein: BG4-PA
Organism: Drosophila melanogaster
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BG4-PA.

Description E-value Query
Range
Subject
Range
gi|28175828 - gi|28175828|gb|AAH43123.1| Ank2 protein [Mus musculus]
178.0 [0..21] [235..460]
gi|109467596 - gi|109467596|ref|XP_001076082.1| PREDICTED: similar to ankyrin 2 isoform 1 [Rattus norvegicus]
173.0 [0..30] [235..3431]
gi|4803663 - gi|4803663|emb|CAB42644.1| ankyrin B (440 kDa) [Homo sapiens]
171.0 [0..33] [235..3440]
gi|109075425 - gi|109075425|ref|XP_001095471.1| PREDICTED: ankyrin 2, neuronal isoform 12 [Macaca mulatta]
171.0 [0..33] [237..3421]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAGRHWSYD SLKQIAIDGC TENVEQLKLI FVEEIGSRRR SDCIRTIEDL IDCLERADEL  60
   61 SEYNVEPLRR ISGNMPQLIE ALSAYTKPEN ILGHPVNLYQ ELRLAEELRQ QLRIAPASQN 120
  121 AQPSVSELAA AVPPTAIQNY ATPAAFTDHK RTMVFKKISE ELGRYWRRLG RSAGIGEGQM 180
  181 DTIEERYPHD LKSQILRLLQ LIEEDDCHDP KHFLLRLCRA LGDCGRNDLR KRVEQIMSH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2gf5A
Description: No description for 2gf5A was found.

Predicted functions:

Term Confidence Notes
protein binding 3.50518632995622 bayes_pls_golite062009
binding 2.81925838257497 bayes_pls_golite062009
transmembrane receptor activity 0.760464878657872 bayes_pls_golite062009
tumor necrosis factor binding 0.732234543123958 bayes_pls_golite062009
receptor activity 0.669399578675615 bayes_pls_golite062009
death receptor activity 0.627802739213643 bayes_pls_golite062009
tumor necrosis factor receptor activity 0.428938788578756 bayes_pls_golite062009
peptidase activator activity 0.409643414613627 bayes_pls_golite062009
apoptotic protease activator activity 0.290908629400391 bayes_pls_golite062009
identical protein binding 0.206123549797411 bayes_pls_golite062009
signal transducer activity 0.201651915574531 bayes_pls_golite062009
molecular transducer activity 0.201651915574531 bayes_pls_golite062009
protein domain specific binding 0.151782936408674 bayes_pls_golite062009
catalytic activity 0.043183590691418 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle