YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0300983, CG3...
Organism: Drosophila melanogaster
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0300983, CG3....

Description E-value Query
Range
Subject
Range
gi|50744908 - gi|50744908|ref|XP_419931.1| PREDICTED: similar to CG12002-PA [Gallus gallus]
224.0 [0..3] [360..303]

Back

Predicted Domain #1
Region A:
Residues: [1-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPMICDLWS GRIWLLILIC LCGFQQSRCF FVDYTENTEL IQQRAGFDVK LQCNLKGLVD  60
   61 ESMLNDIKIH WYFKQCSENN CHQLGSVDEW TALPCEPSLC RPELWLRNVT ERYSGLYKCS 120
  121 INPHIWDKAQ AVDVQLVRTY QLDVKNTSLA APEFVDSYPN NKTTLVGSRV VFQCRVHSEE 180
  181 HPTIKWFRRQ TYVGTQSGGE ASSAPTTSNF SNHIVRYNGR TYELLSTDPE KMMAPQIYLS 240
  241 KLILDGVRLR DAGHYACVAI SYRGHKIREA FLDVLADVED TDQENEYWSD YGNEDEGVPT 300
  301 SDRREFLLLF LMPLGLALLP LTVWFSYLLY KRCSVGHGDC QRIDSDEDLD TERCVLGGNK 360
  361 H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.39794
Match: 1cs6A
Description: Axonin-1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
receptor activity 4.00123250685257 bayes_pls_golite062009
transmembrane receptor activity 3.81769911097805 bayes_pls_golite062009
molecular transducer activity 3.10913345555941 bayes_pls_golite062009
signal transducer activity 3.10913345555941 bayes_pls_golite062009
fibroblast growth factor receptor activity 2.75951198337177 bayes_pls_golite062009
binding 2.53652619212064 bayes_pls_golite062009
fibroblast growth factor 1 binding 1.86388828628974 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 1.74776085792325 bayes_pls_golite062009
transmembrane receptor protein kinase activity 1.56112637325462 bayes_pls_golite062009
fibroblast growth factor binding 1.47937704388007 bayes_pls_golite062009
protein binding 1.17809977833322 bayes_pls_golite062009
G-protein coupled receptor activity 1.02428106476324 bayes_pls_golite062009
growth factor binding 0.743938595786319 bayes_pls_golite062009
peptide binding 0.729048089532569 bayes_pls_golite062009
protein complex binding 0.50170410061385 bayes_pls_golite062009
receptor binding 0.472293196688823 bayes_pls_golite062009
protein tyrosine kinase activity 0.449871840253113 bayes_pls_golite062009
olfactory receptor activity 0.20101044847022 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle