| Protein: | bon-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1133 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bon-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
591.0 | [0..1] | [1133..1] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 MDMDLEQLKN DFLPLIAGIK QEQLDAVPTD ALPQMSTPNT ASGAPTTSSL SSSSLSLSNP 60
61 CDSAEKRSES NSSASAKFTL FKCVYCAQLL GSNDRPKLLE CLHVACAQCV STKFSELDRS 120
121 LPPLIHCPVC DNASQQEFIV DNQFLIEQCT AGDSGDGVGL LGLTGEGQKS SAAASIQCSS 180
181 CSDGAVATSW CVDCSEYICD SCVQAHQRLK ITKDHTIKPK DEANNEQLA
|
| Detection Method: |  |
| Confidence: | 14.0 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.63922952361775 | bayes_pls_golite062009 |
| protein binding | 1.62051249360163 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.723281698537249 | bayes_pls_golite062009 |
| chromatin binding | 0.69891726987238 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.547944704024543 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.34266089851206 | bayes_pls_golite062009 |
| transcription regulator activity | 0.304766790522223 | bayes_pls_golite062009 |
|
Region A: Residues: [230-284] |
1 11 21 31 41 51
| | | | | |
1 GAAGVDKLHM CQLHPQEKLS LFCETCDKLT CRDCQLSDHR DHKYKFAHEI ATESR
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 2djaA |
| Description: | No description for 2djaA was found. |
| Term | Confidence | Notes |
| binding | 2.38976505793668 | bayes_pls_golite062009 |
| protein binding | 1.34352784773612 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.88419224843535 | bayes_pls_golite062009 |
|
Region A: Residues: [285-410] |
1 11 21 31 41 51
| | | | | |
1 QALSTLVSEI NYKRFLLSSA TKVIDDRQQL IHDKKKDLIK EITAMAVKIT NTVNTRGKQL 60
61 IMRLNEVCDS KLKVLVEKKE TLQLLSDNTD HCIDFMQNAL EKGSDFAILS SKKSLVRHLQ 120
121 KLKCQR
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1ei3B |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [411-962] |
1 11 21 31 41 51
| | | | | |
1 ADIPNPEIPV RIQVQLNQVS DLQKVISQLG IIIVDGKPYP PTPSPNGTPQ PQHPPRQPPS 60
61 PNMAPPLRPG LPPGMPAGLS PNGPPVNFGP QNGPPLYSNA AQQQFNNLSM SRSFPGDGSG 120
121 KVRFGGMPPV GMQRHGQPHV SSSTHPQNMD ISLRGLLNNQ AAQSPNAHMA FNGPPSYPGG 180
181 PQGAPAPAHQ PMGPQMRPHF MPGQQGFSQG GGPGGGPRDA NFMNSNARFQ SQYQRMANHA 240
241 QQAAAAAAMA GAAGGGGGQI PSPGALQRPQ MMSNPMQNVS AMQNSLGFHG SQAGFNTGPP 300
301 QTSPQLGGGG MHSLAKWHIP QSAQQSNMCS QQGPLLPFAN GRQTSENFKI SLKSPNTLKN 360
361 STPPSLGGGG AGHQGHGNGS SSAQLNAAAL GLGPAVSILS NVTSTNPKTP SPSTHENTKD 420
421 FTEPIDKVRD DSINDLIATI AKLDSNGVQV LPEGRTKTTS PQVHSSTDLS NTQEVNNKNE 480
481 QKDDPNEDWC AVCLDGGELM CCDKCPKVFH QNCHIPAISS LPDESESWQC LLCVNIKELT 540
541 KTEGSEKSSS GE
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [963-1133] |
1 11 21 31 41 51
| | | | | |
1 LSALELRILQ RICLELYCQY EQSLNFREPE SPANTSYYEI VSSPMSLDVI RTRLDPSSPN 60
61 HYKDIAGFVS DVRLIFSNTY LFYQEDTKTY SNAKYLENFF EEQLAKWLPQ FEGTKPQGKR 120
121 NTSNSPALLG VNATGSPSPI ENGRKSCGSA SLGDSDGACL PAKRARRSAH E
|
| Detection Method: | |
| Confidence: | 34.30103 |
| Match: | 2f6jA |
| Description: | No description for 2f6jA was found. |
