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View Structure Prediction Details

Protein: FBpp0306660, alp...
Organism: Drosophila melanogaster
Length: 1249 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306660, alp....

Description E-value Query
Range
Subject
Range
gi|4519906 - gi|4519906|dbj|BAA75817.1| alpha-mannosidase [Drosophila melanogaster]
1097.0 [0..1] [1249..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFKLFRRGS ARCIGLLSAF VTILLCLYYI SIGQPNPTPI SETGAPSAAL RGSPLSGLTG  60
   61 FSVDGGSSSI IHQQKQQLVI ASNQKKSSET KSAQTSVSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-1249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEQSEEQYTN SNWGDKCYEL IQSNTNITAS EEHSKFDFQP EWMRSKEYWD RGFEERFDAQ  60
   61 KKDKQRPPLK IIVVPHSHND PGWLKTFTNY FQSDSRQILN LLVTKMQEYT DMTFIWSEIS 120
  121 FLQLWWDQAH PTKQRALKRL IDAGRIEITT GGWVMTDEAN VHIYPMLDQL IEGHQWLKNN 180
  181 LNVTPKVGWS IDPFGHGSTV PYLLSGANFE GTIIQRIHYA WKQWFARQQS GDFIWKPYWR 240
  241 SRKDKDSEAG SLLTHNMPFD IYSIKGSCGP HPFICLNFDF RKIPGEYTEY SVKAQFITDD 300
  301 NLESKAQLLL EQYARTASLF PHNVALIPVG DDFRYNKDRE VDQQYQNYKK LIDHIMANRR 360
  361 LYNADIRFGT PSDYFEAIKE RMKDHTPGFP TFKGDFFVYS DIFSEGRPAY WSGYFTTRPF 420
  421 YKLLSSELEH QLRSAEIVFT LAYNTARQAK RENAIKIYEK NYELIINARR NLGLFQHHDA 480
  481 ITGTSKAAVM RDYAMRLFES TQNMVKMQES CLELLLQKGQ PRHHGFLLSE FERDNFNKLP 540
  541 RKMPIQMANG DESTPTVPAG EGGAGGSSSS GSVGSFVLYN SLAQKRLEVV TLRVQHPNVK 600
  601 IVNDKGVELN HIQINPVWNI TDTYEQGLGT SVSGTVGRIR TSTRQFEVMF VAELEPLSLS 660
  661 TYRVQVDEVN FKRNIATIYC DDCTESQPAS VSPPEEIESS PTSVFEARGK PAGDIQLENP 720
  721 HMRLLFDEKS GFLKTITRKN QKKELLKPLQ CNIKFAAYRS AQFHSGAYLF KTDPEQSEAE 780
  781 KEVLEGYTDM RIIITSGPIA SDVTVIYGPF LAHTVRIFNT RTHLDAAIYV ENDIDFEPPP 840
  841 KNRETELFMR FVTNIDNIAQ APMQRDPLKE PVDAATMPEL PVFYSDQNGF QYHERIKVPA 900
  901 IGIEGNYFPI TSGAFIQDSR LRLTLLTTHA QGAASYEPGQ LEVMLDRRTL YDDYRGMGEG 960
  961 VVDSRLTRHK FWLLVEDLPG GQHVTQPPSY KVLSQQAQQL ANALRYPPNL YFVSNLEQPE1020
 1021 LAAALLPLVR LLPKGPLPCD VHLTTLRTLS DPELQLFPSA SALLVLHRQG FDCSVSAGRE1080
 1081 LSMEAICPLS SKGLGNVQLG RLSLHTIEAT SLTGTEQKSS RESYHIRSLA EISLEPMELR1140
 1141 TFNLTFRSEV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1ps3A
Description: Golgi alpha-mannosidase II in complex with kifunensine
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
mannosidase activity 6.01915916767417 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.31715812247646 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.59000499388951 bayes_pls_golite062009
hydrolase activity 3.47408297144232 bayes_pls_golite062009
alpha-mannosidase activity 3.43578718881717 bayes_pls_golite062009
mannosyl-oligosaccharide mannosidase activity 2.67474348614438 bayes_pls_golite062009
deacetylase activity 2.13686837707321 bayes_pls_golite062009
binding 1.29644842078336 bayes_pls_golite062009
catalytic activity 1.17882014774774 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.00994109266252 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 0.68102716507433 bayes_pls_golite062009
aldose 1-epimerase activity 0.521235680233587 bayes_pls_golite062009
mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity 0.511393435253234 bayes_pls_golite062009
racemase and epimerase activity 0.473636146090495 bayes_pls_golite062009
protein binding 0.394432087623352 bayes_pls_golite062009
isomerase activity 0.106573908779409 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle