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View Structure Prediction Details

Protein: CG6904-PC, FBpp0...
Organism: Drosophila melanogaster
Length: 689 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6904-PC, FBpp0....

Description E-value Query
Range
Subject
Range
CG6904-PA - This gene is referred to in FlyBase by the symbol Dmel\CG6904 (CG6904, FBgn0038293). It is a protein...
gi|195570770, gi... - gi|195570770|ref|XP_002103377.1| GD20381 [Drosophila simulans], gi|194199304|gb|EDX12880.1| GD20381 ...
gi|194183899, gi... - gi|195501443|ref|XP_002097798.1| GE26410 [Drosophila yakuba], gi|194183899|gb|EDW97510.1| GE26410 [D...
gi|194900908, gi... - gi|194900908|ref|XP_001979997.1| GG20891 [Drosophila erecta], gi|190651700|gb|EDV48955.1| GG20891 [D...
497.0 [0..1] [689..21]

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Predicted Domain #1
Region A:
Residues: [1-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRFSRVES GADLKDYFDR GDIASRENRW NFEVAWEVAN KVGGIYTVIR SKAYVSTEEM  60
   61 GEQLCMMGPY KEHCARTEME EMEFPRGNPL LDAVNSLRSR GYKIHTGRWL VDGNPQLILF 120
  121 DIGSAAWKLD QFKSEMWEKC HIGIPHLDIE TNDAIILGFM IAEFLEEFRN FAVTYSQNNE 180
  181 LSAPRIVAHF HEWQAGVGLI VLRTRLVEIA TVFTTHATLL GRYLCAGNTD FYNNLDKFAV 240
  241 DEEAGKRQIY HRYCLERGAT HLAHVFTTVS EITGYEAEHL LKRKPDIITP NGLNVKKFSA 300
  301 IHEFQNLHAV AKEKINEFVR GHFYGHIDFD LDKTLYFFIA GRYEFGNKGA DIFIEALARL 360
  361 NAMLKHEKPD TTVVAFLIFP TKTNNFNVDS LRGHAVIKQL RDTINNVQQA VGKRMFDTCL 420
  421 QGNIPNADDL LQKDDLVKIK RCMFAMQRDS MPPVTTHNVA DDWNDPVLSS IRRC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.522879
Match: 1rzuA
Description: Crystal structure of the glycogen synthase from A. tumefaciens in complex with ADP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glycogen phosphorylase activity 5.43556332287206 bayes_pls_golite062009
phosphorylase activity 4.4363209226962 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 3.70184884300914 bayes_pls_golite062009
catalytic activity 2.65148466065976 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 2.62403914335522 bayes_pls_golite062009
glucosyltransferase activity 2.48423599937201 bayes_pls_golite062009
UDP-glucosyltransferase activity 2.22592863643386 bayes_pls_golite062009
transferase activity 2.18054407163329 bayes_pls_golite062009
UDP-glycosyltransferase activity 2.13085705769565 bayes_pls_golite062009
UDP-N-acetylglucosamine 2-epimerase activity 1.55280519670033 bayes_pls_golite062009
oxidoreductase activity 0.974556371594238 bayes_pls_golite062009
alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity 0.849686864309466 bayes_pls_golite062009
carbohydrate phosphatase activity 0.78952375993773 bayes_pls_golite062009
binding 0.399722153246393 bayes_pls_golite062009
mannosyltransferase activity 0.253888301381021 bayes_pls_golite062009
protein binding 0.198267161626932 bayes_pls_golite062009
sugar binding 0.14686473522482 bayes_pls_golite062009
drug binding 0.102804615007901 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [475-689]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLFNSRHDRV KMVFHPEFLT STNPLFGIDY EEFVRGCHLG VFPSYYEPWG YTPAECTVMG  60
   61 IPSVTTNLSG FGCFMEEHIS DPKSYGIYIV DRRYIGLENS VQQLSSFMME FSRLNRRQRI 120
  121 IQRNRTERLS DLLDWRTLGI YYRQARVKAL QAVYPDYVDE LSLYGSKNNL IFSRPHSEPP 180
  181 SPTSSRHTTP APSVHGSDDE DSVDEETELK ELGIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 2gejA
Description: No description for 2gejA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle