| Protein: | CG9799-PA |
| Organism: | Drosophila melanogaster |
| Length: | 922 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9799-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
748.0 | [0..2] | [748..746] |
|
Region A: Residues: [1-613] |
1 11 21 31 41 51
| | | | | |
1 MTHLRSEDKP QSEERKSVFK ESSCIFRRNR ALGYVSNQVP AVTRYVQRRR DTLLITCIGR 60
61 SFQVYTANHF RLLHVSGLHP DEITALATDR LHTYTASNKC IYAWRAGKHI RHVYRGHQKD 120
121 VHLLLPFGSS LIAIDRQNVL KVWNISTEDV YLEVPFRSEE FQITAVTHPP TYINKIVLGS 180
181 QQGQLKILNI KKNSVVCTLS HHDSRITCIE PSPALDVVAV GHGDGTIILL NLKFDEVLMS 240
241 FQQDWGQVTN LSFRTDGPPI LVSACSNGYM AFWNLEERKL AGQLQAHEES VTTAICLPSE 300
301 PVVFTTSPDN SMRMFVFDMP DGGARQLRIR EGHTKPPFCI RYHGSSGVSI LSSGEDSTMR 360
361 VFSTISESLN KSMGRATYNP KATKKKNRFE HDKFGMPPIL EFTSDTAREK EWDNIAAIHA 420
421 GVIQTTTWSF GKNRMGEHRL VPKQFQNSNR TNFQNETTCI VLTHCGNFVI IGYSSGDIER 480
481 FNIQSGLHRA TYGSPAHKMA VRGLASDNLN QTVISGCSEG LLKFWSFKGK VDKPLATLRL 540
541 ADGIALIRQH RESSMLAIGL ETFKIFVVDM HTRVIVRKFV GHTAKLNDLT FSPDSRWLIT 600
601 AAMDSTIKVW DIP
|
| Detection Method: |  |
| Confidence: | 67.221849 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| snoRNA binding | 6.03079504484743 | bayes_pls_golite062009 |
| 3.41022148055944 | bayes_pls_golite062009 | |
| RNA binding | 3.0829625416797 | bayes_pls_golite062009 |
| binding | 2.22722319261713 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.5283366007575 | bayes_pls_golite062009 |
| transcription regulator activity | 1.25687092973217 | bayes_pls_golite062009 |
| nucleic acid binding | 1.20712373307552 | bayes_pls_golite062009 |
| structural molecule activity | 1.20572493724069 | bayes_pls_golite062009 |
| protein binding | 1.11897341394404 | bayes_pls_golite062009 |
| actin binding | 0.794986868016276 | bayes_pls_golite062009 |
| DNA binding | 0.711274653406079 | bayes_pls_golite062009 |
| transcription factor activity | 0.243992994917491 | bayes_pls_golite062009 |
| ligase activity | 0.20682813699621 | bayes_pls_golite062009 |
| tubulin binding | 0.0577116761374565 | bayes_pls_golite062009 |
| mRNA binding | 0.0519838181830878 | bayes_pls_golite062009 |
|
Region A: Residues: [614-748] |
1 11 21 31 41 51
| | | | | |
1 SSYMVDHFRV EAPCVSLSMS PNGDFLATAH VGLLGIYLWA NKTLFNQISL RSIDPLEPAP 60
61 YVGLPTNVCD AMELEDGMKE LEIDEEDESK LGELVDTKYE TPTQLSEELI TLSGLAASRW 120
121 QNLLDLELIK QRNKP
|
| Detection Method: | |
| Confidence: | 44.39794 |
| Match: | 1gxrA |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [749-922] |
1 11 21 31 41 51
| | | | | |
1 KAPPKAPKQA PFFLPTVSGL ELRFDVENGQ KEEDESRIRK ASTLNNLTAF GQLLEETADS 60
61 LDFASAVAHL TQLGPSMVDF EIKSLHPEAG GTLLAMLQFL KLVKFMFGTN LNFELAQSYL 120
121 SVFLRSHGLG LTEFPDLVKE LRTVSQVQQE AWQRVEEKLI YGTGVVAALR NFAH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
