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View Structure Prediction Details

Protein: gi|24645763, gi|...
Organism: Drosophila melanogaster
Length: 614 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24645763, gi|....

Description E-value Query
Range
Subject
Range
gi|116129773, gi... - gi|118782871|ref|XP_312552.3| ENSANGP00000014298 [Anopheles gambiae str. PEST], gi|116129773|gb|EAA0...
713.0 [0..1] [554..1]

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Predicted Domain #1
Region A:
Residues: [1-41]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTNTLCAQ HIGWHFKKHW LVQGRRVPKE TGAAAELLKL G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [42-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLVKNPEDLL NAKVEKKLVD IVGAREKPVP EDSRHPDWHP TVCNTYSDNS VLIGGLPQAQ  60
   61 VLTNSIVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [110-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTFPKHIEDA IASQQLPNSV DKSVRHAILA SHVLDAEQVK LPKVRLPERP AFNLPRSYGI  60
   61 SHERVNRLLV NKLLHESEKL AGRSVSVRRK LIDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [204-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASFKTFLSKD GDLLGFSINA EKVVFANRAI EGVKGKFEGD LPDLYPMKST ISIPKYHIYQ  60
   61 AKNLYPLRSD ITCSHPHTIF TVFNKHQVKN SHGSEVTTSQ LQARTLVKAF VVAAARAKQL 120
  121 HGDSVGALPK PIVVQSVQTD GRTFHFGVLQ LNTLDLGANS TAKNYWFHRQ NYNLQKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [381-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STSSNNSGTS SETSETQSVD DQQGTPHSAI RSSSASLSRA KNSWRRMKEL AAEKEKENEA  60
   61 KRPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [445-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WRAVSVSTLT KPDKSALLRA KLLDASRRLR AGKANVALQT DFVPTKLMKE VSFGVQKDLI  60
   61 LLKDVGILTD GQYSKKKDGY EKYVLTYSMS QMTDSVPTVS RQTQTLLPKA YNKDLVNSYL 120
  121 PKSDEDDSDG ISDVEKRLGD QIAKIRRLNF DESNLSRGKN RLVRPAAVHR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle