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View Structure Prediction Details

Protein: gi|24645763, gi|...
Organism: Drosophila melanogaster
Length: 614 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24645763, gi|....

Description E-value Query
Range
Subject
Range
gi|116129773, gi... - gi|118782871|ref|XP_312552.3| ENSANGP00000014298 [Anopheles gambiae str. PEST], gi|116129773|gb|EAA0...
713.0 [0..1] [554..1]

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Predicted Domain #1
Region A:
Residues: [1-41]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTNTLCAQ HIGWHFKKHW LVQGRRVPKE TGAAAELLKL G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [42-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLVKNPEDLL NAKVEKKLVD IVGAREKPVP EDSRHPDWHP TVCNTYSDNS VLIGGLPQAQ  60
   61 VLTNSIVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [110-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTFPKHIEDA IASQQLPNSV DKSVRHAILA SHVLDAEQVK LPKVRLPERP AFNLPRSYGI  60
   61 SHERVNRLLV NKLLHESEKL AGRSVSVRRK LIDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [204-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASFKTFLSKD GDLLGFSINA EKVVFANRAI EGVKGKFEGD LPDLYPMKST ISIPKYHIYQ  60
   61 AKNLYPLRSD ITCSHPHTIF TVFNKHQVKN SHGSEVTTSQ LQARTLVKAF VVAAARAKQL 120
  121 HGDSVGALPK PIVVQSVQTD GRTFHFGVLQ LNTLDLGANS TAKNYWFHRQ NYNLQKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [381-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STSSNNSGTS SETSETQSVD DQQGTPHSAI RSSSASLSRA KNSWRRMKEL AAEKEKENEA  60
   61 KRPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [445-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WRAVSVSTLT KPDKSALLRA KLLDASRRLR AGKANVALQT DFVPTKLMKE VSFGVQKDLI  60
   61 LLKDVGILTD GQYSKKKDGY EKYVLTYSMS QMTDSVPTVS RQTQTLLPKA YNKDLVNSYL 120
  121 PKSDEDDSDG ISDVEKRLGD QIAKIRRLNF DESNLSRGKN RLVRPAAVHR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle