| Protein: | ps-PH, ps-PG, ps... |
| Organism: | Drosophila melanogaster |
| Length: | 572 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ps-PH, ps-PG, ps....
| Description | E-value | Query Range |
Subject Range |
|
|
321.0 | [0..12] | [572..12] |
|
Region A: Residues: [1-247] |
1 11 21 31 41 51
| | | | | |
1 MAEDATMETC PSPETGDSRK RPLDSDPENE QTKRSHFSSG ESVCSGIEVE IENNNNNHIH 60
61 HGETTYHMKI LVPAVASGAI IGKGGETIAS LQKDTGARVK MSKSHDFYPG TTERVCLITG 120
121 STEAIMVVME FIMDKIREKP DLTNKIVDTD SKQTQERDKQ VKILVPNSTA GMIIGKGGAF 180
181 IKQIKEESGS YVQISQKPTD VSLQERCITI IGDKENNKNA CKMILSKIVE DPQSGTCLNV 240
241 SYADVSG
|
| Detection Method: |  |
| Confidence: | 33.522879 |
| Match: | 2annA |
| Description: | No description for 2annA was found. |
|
Region A: Residues: [248-468] |
1 11 21 31 41 51
| | | | | |
1 PVANFNPTGS PYATNQNAIN SSTASLNSTL GTTIGGANSA ASLLVNGTGI NLSINLGSPN 60
61 PAPNLAVATQ LLEHIKVAMR GSGYSETVTN EVVAALSVLA KYGVLGMGVG VSHTNGAHST 120
121 LGNFLGVTTL DQQTAAAASA ATASNVFGAV GQVNLEQYAA AVASAAAASR PTQSQLDAAA 180
181 VQFDPFRHLG SATAPAATPV SLNNNSFGLT ATTGTATTAQ L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [469-572] |
1 11 21 31 41 51
| | | | | |
1 GGLSKSPTPG DLSSKDSKNV EVPEVIIGAI LGPSGRSLVE IQHVSGANVQ ISKKGIFAPG 60
61 TRNRIVTITG QPSAIAKAQY LIEQKINEEE TKRARQIPLT TVVN
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1ec6A |
| Description: | Neuro-oncological ventral antigen 2, nova-2, KH3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 5.18414740305744 | bayes_pls_golite062009 |
| mRNA binding | 3.82977088614136 | bayes_pls_golite062009 |
| nucleic acid binding | 3.68444148122352 | bayes_pls_golite062009 |
| binding | 2.8667878224392 | bayes_pls_golite062009 |
| transcription regulator activity | 1.43703138180882 | bayes_pls_golite062009 |
| DNA binding | 1.20852534725468 | bayes_pls_golite062009 |
| 1.02980840568405 | bayes_pls_golite062009 | |
| poly-pyrimidine tract binding | 0.63404501189528 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.489176583045793 | bayes_pls_golite062009 |
| protein binding | 0.468975312217329 | bayes_pls_golite062009 |
| transcription factor activity | 0.386248501195543 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
