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View Structure Prediction Details

Protein: alpha-Man-II-PA
Organism: Drosophila melanogaster
Length: 1108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alpha-Man-II-PA.

Description E-value Query
Range
Subject
Range
gi|517481 - gi|517481|emb|CAA54732.1| putative golgi alpha-mannosidase II [Drosophila melanogaster]
1070.0 [0..1] [1108..1]

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Predicted Domain #1
Region A:
Residues: [1-1108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRIRRRFAL VICSGCLLVF LSLYIILNFA APAATQIKPN YENIENKLHE LENGLQEHGE  60
   61 EMRNLRARLA ETSNRDDPIR PPLKVARSPR PGQCQDVVQD VPNVDVQMLE LYDRMSFKDI 120
  121 DGGVWKQGWN IKYDPLKYNA HHKLKVFVVP HSHNDPGWIQ TFEEYYQHDT KHILSNALRH 180
  181 LHDNPEMKFI WAEISYFARF YHDLGENKKL QMKSIVKNGQ LEFVTGGWVM PDEANSHWRN 240
  241 VLLQLTEGQT WLKQFMNVTP TASWAIDPFG HSPTMPYILQ KSGFKNMLIQ RTHYSVKKEL 300
  301 AQQRQLEFLW RQIWDNKGDT ALFTHMMPFY SYDIPHTCGP DPKVCCQFDF KRMGSFGLSC 360
  361 PWKVPPRTIS DQNVAARSDL LVDQWKKKAE LYRTNVLLIP LGDDFRFKQN TEWDVQRVNY 420
  421 ERLFEHINSQ AHFNVQAQFG TLQEYFDAVH QAERAGQAEF PTLSGDFFTY ADRSDNYWSG 480
  481 YYTSRPYHKR MDRVLMHYVR AAEMLSAWHS WDGMARIEER LEQARRELSL FQHHDGITGT 540
  541 AKTHVVVDYE QRMQEALKAC QMVMQQSVYR LLTKPSIYSP DFSFSYFTLD DSRWPGSGVE 600
  601 DSRTTIILGE DILPSKHVVM HNTLPHWREQ LVDFYVSSPF VSVTDLANNP VEAQVSPVWS 660
  661 WHHDTLTKTI HPQGSTTKYR IIFKARVPPM GLATYVLTIS DSKPEHTSYA SNLLLRKNPT 720
  721 SLPLGQYPED VKFGDPREIS LRVGNGPTLA FSEQGLLKSI QLTQDSPHVP VHFKFLKYGV 780
  781 RSHGDRSGAY LFLPNGPASP VELGQPVVLV TKGKLESSVS VGLPSVVHQT IMRGGAPEIR 840
  841 NLVDIGSLDN TEIVMRLETH IDSGDIFYTD LNGLQFIKRR RLDKLPLQAN YYPIPSGMFI 900
  901 EDANTRLTLL TGQPLGGSSL ASGELEIMQD RRLASDDERG LGQGVLDNKP VLHIYRLVLE 960
  961 KVNNCVRPSE LHPAGYLTSA AHKASQSLLD PLDKFIFAEN EWIGAQGQFG GDHPSAREDL1020
 1021 DVSVMRRLTK SSAKTQRVGY VLHRTNLMQC GTPEEHTQKL DVCHLLPNVA RCERTTLTFL1080
 1081 QNLEHLDGMV APEVCPMETA AYVSSHSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1ps3A
Description: Golgi alpha-mannosidase II in complex with kifunensine
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
mannosidase activity 6.01915916767417 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.31715812247646 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.59000499388951 bayes_pls_golite062009
hydrolase activity 3.47408297144232 bayes_pls_golite062009
alpha-mannosidase activity 3.43578718881717 bayes_pls_golite062009
mannosyl-oligosaccharide mannosidase activity 2.67474348614438 bayes_pls_golite062009
deacetylase activity 2.13686837707321 bayes_pls_golite062009
binding 1.29644842078336 bayes_pls_golite062009
catalytic activity 1.17882014774774 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.00994109266252 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 0.68102716507433 bayes_pls_golite062009
mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity 0.511393435253234 bayes_pls_golite062009
racemase and epimerase activity 0.473636146090495 bayes_pls_golite062009
protein binding 0.394432087623352 bayes_pls_golite062009
isomerase activity 0.106573908779409 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle