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View Structure Prediction Details

Protein: CG8036-PD
Organism: Drosophila melanogaster
Length: 580 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8036-PD.

Description E-value Query
Range
Subject
Range
gi|168826063, gi... - gi|32029978|ref|ZP_00132914.1| COG0021: Transketolase [Haemophilus somnus 2336], gi|170717934|ref|YP...
531.0 [0..3] [578..39]

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Predicted Domain #1
Region A:
Residues: [1-580]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLFFQQLR LNLKHPRDPS SDRFILSKGH AAPILYAAWA EAGLFPIADL NNLRKIDSDL  60
   61 EGHPTPRLNF IDVGTGSLGQ GVAVGAGMAY VGKNFDKADY RTYVVVGDGE SAEGSIWESL 120
  121 HFAGHYKLDN LCVIFDVNRL GQSEATSLQH KLDVYRDRLE AFGFNAVVVD GHDVEELSKA 180
  181 FHCAAITKNK PTAIIAKTFK GRDFPNIEDL DNWHGKPLGD KAAEVVKHLE GLIVNKNVKL 240
  241 TPKPVPKTGA APDVDINNIK LSSPPAYKLG DSIATRLAYG TALAKIGQNN LRVVALDGDT 300
  301 KNSTFSDKLK NLDPQRYIEC FIAEQNLVGV AVGAACRRRT VAFVSTFATF FTRAFDQIRM 360
  361 GAISQTNVNF VGSHCGCSIG EDGPSQMGLE DIAMFRTIPG STIFYPSDAV STERAVELAA 420
  421 NTKGVCFIRT SRPNTCVIYD NEEPFTIGRG KVVRQKSSDE VLLIGAGITL YECLAAADQL 480
  481 EKNCITVRVI DPFTVKPLDA ELIIEHGKQC GGRVVVVEDH YQQGGLGEAV LSALAGERNF 540
  541 VVKHLYVPTV PRSGPPSVLI DMFGISARHV VNAVNEILKD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 147.0
Match: 1qgdA
Description: Transketolase (TK), Pyr module; Transketolase (TK), PP module; Transketolase (TK), C-domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transketolase activity 7.85070252105246 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 4.74831149446647 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 2.93250853993668 bayes_pls_golite062009
pyruvate dehydrogenase activity 2.81702263447118 bayes_pls_golite062009
pyruvate dehydrogenase (acetyl-transferring) activity 2.6977837113283 bayes_pls_golite062009
catalytic activity 2.25537597692103 bayes_pls_golite062009
binding 0.980920092099572 bayes_pls_golite062009
transferase activity 0.413024577830522 bayes_pls_golite062009
thiamin pyrophosphate binding 0.297191393111081 bayes_pls_golite062009
acetolactate synthase activity 0.173822256668691 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle