| Protein: | FBpp0311305, FBp... |
| Organism: | Drosophila melanogaster |
| Length: | 763 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311305, FBp....
| Description | E-value | Query Range |
Subject Range |
|
|
261.0 | [0..314] | [757..1] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MDASLEESMD SDGASSPITK TEATESPPEA GLNGNGSGSG STSQETPNYG VAILKEKPSE 60
61 AHRSKPFNAF SGRPIGEHTA QQQALQQQQL QQQQQPQQPQ QQAPSGANGV TGPPEIWVET 120
121 KAEDGRSYYY HAVTRETTWS RPDGPAVKIM TQAEVEEMAK R
|
| Detection Method: |  |
| Confidence: | 2.37 |
| Match: | 1o6wA |
| Description: | Splicing factor prp40 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.182048695645 | bayes_pls_golite062009 |
| binding | 3.08386768818066 | bayes_pls_golite062009 |
| transcription activator activity | 2.05338377709657 | bayes_pls_golite062009 |
| transcription factor binding | 1.94857953695695 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.79381302696181 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.67777735708173 | bayes_pls_golite062009 |
| protein binding | 1.17020309171645 | bayes_pls_golite062009 |
| catalytic activity | 0.231344568578849 | bayes_pls_golite062009 |
| transcription repressor activity | 0.135918306396444 | bayes_pls_golite062009 |
|
Region A: Residues: [162-310] |
1 11 21 31 41 51
| | | | | |
1 PAQAAKTEAK AGETSVEIPP VSSHLTSQPP PHLMSQPPPN AAAPLLSQPP PNVRQQPPPM 60
61 FQPPGMQAPP GFGQPPFCMP PPTYGFPGGP APAGAPWGVG IPPWQQQQHM QDKPAKSLII 120
121 KPGVIDPAVI ARAAEWSEHR APDGRPYYF
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [311-512] |
1 11 21 31 41 51
| | | | | |
1 HAGRGESVWE KPQALRDMEA ARMAAHSGVA PAVATAPSGL PPHLLPNPMM HMPPGSGPPG 60
61 FDPHAAFAAA AAAMKANSEN TKAAQAAALE KEAKKAAEEK RKKEEEQKKA AASAKQTDKS 120
121 RPVTSTPIAG TPWCVVWTGD SRVFFYNPST RTSVWDRPED LLNREDVDKA VNERPEQLKT 180
181 PQEKSAEAEQ KSGEEANQEQ AK
|
| Detection Method: | |
| Confidence: | 2.27 |
| Match: | 1o6wA |
| Description: | Splicing factor prp40 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.182048695645 | bayes_pls_golite062009 |
| binding | 3.08386768818066 | bayes_pls_golite062009 |
| transcription activator activity | 2.05338377709657 | bayes_pls_golite062009 |
| transcription factor binding | 1.94857953695695 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.79381302696181 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.67777735708173 | bayes_pls_golite062009 |
| protein binding | 1.17020309171645 | bayes_pls_golite062009 |
| catalytic activity | 0.231344568578849 | bayes_pls_golite062009 |
| transcription repressor activity | 0.135918306396444 | bayes_pls_golite062009 |
|
Region A: Residues: [513-560] |
1 11 21 31 41 51
| | | | | |
1 SQVQAQQLDQ VQRVDADDDD DDEVIKIRTE SESSVEEVPT KRVRMISK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [561-634] |
1 11 21 31 41 51
| | | | | |
1 SKRAEDAALE AEQRAAKERA LVPLEMRVTQ FKEMLREKDV SAFSTWEKEL HKIVFDPRYL 60
61 LLTSKERKQV FEKY
|
| Detection Method: | |
| Confidence: | 12.09691 |
| Match: | 2dodA |
| Description: | No description for 2dodA was found. |
|
Region A: Residues: [635-763] |
1 11 21 31 41 51
| | | | | |
1 VKDRAEEERK EKRNKMRQKR EDFRSLMEEA RLHGKSSFSE FSQRNAKDER YRAIEKVRER 60
61 ESLFNEYIVE VRRREKEDKL LKKEQPLASR LQHKCTTQNT KIHKSNSIEN HLYNTLDGLF 120
121 RPPSAIAVH
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 2e71A |
| Description: | No description for 2e71A was found. |
