| Protein: | Hcs-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1041 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hcs-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
588.0 | [0..40] | [1039..2] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MLTLYYVSAT VLQSWRIQKA CSKIAEHLAQ PSSIAFYTLQ SGSDDGFDPA LASSELCCNR 60
61 NAAKVTDILW LHANQRGCCL RPLQTLHITP WISFPPAPSL LPFSYAADTL TPASTPTEAD 120
121 VPRQQRVSLS AQGEERMQLL LEADIEPLQR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [151-393] |
1 11 21 31 41 51
| | | | | |
1 PSSEDTSAVR LEDYGKLIAW KIDSHLAVLI ETDVEHFTKL LITTFLRNNL CINDQLPLLR 60
61 IESVQREGDP QPFELLAKHL KRQSRISVGL DKDGWKKHME DLRAVGVLAH QATEFEYQRN 120
121 RSEGRTKSDP TTHDQRPTSE LLAKAVAVVE PTNKAYLSPA RTTEASLKAE AKGTSTKPFP 180
181 TKSDAKPATL AKSEGTPATS KEDSKLTPTK GALKTSELEK LAAVQAAQQQ KKEAVQVSPV 240
241 KAA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [394-512] |
1 11 21 31 41 51
| | | | | |
1 FLAKPPMLSK HDEPDKASDQ PTKPRKSFEA VKPLNSPPSS RAAPSRPVLQ RNKDSLQDAK 60
61 PLNVLVYSDS ASARESTLAT LQQLLERNVY TIYPLMPQQA AQKYWTEQTA LLVVCGSVA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [513-707] |
1 11 21 31 41 51
| | | | | |
1 HGIGQILVDY FLQGGKVLSL CSDILHFVLP NYRTAEVREH ELVQFSYDKW QRVKMMHHIF 60
61 CYQPSPVKKH FSTDSEESTK SHSRKPSMEL KDLAGHSHNL DVHVLGTEET WNTPSLMLAK 120
121 SLQSGGKAVF SQVHLEMNPS EFESDETKYS ILKQNERTRL EIFADLLGKY LDVQVRGGDG 180
181 VDQPQPGVVY KHAYF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [708-1041] |
1 11 21 31 41 51
| | | | | |
1 LGRHEAKFEL LEKLRLRCSG SDNVIATPNL TMKFCGKDDK PPVANNNVLP ILIHSCPDDF 60
61 STVDYFDNLK TEHIGRLVIY APVVSSSMHL INNLELIHGL AVLPVQQTSG VGRRNNQWLS 120
121 PPGCAMFSLQ LHLTMDSALS SRLPLLQHLV GTAIVNSLRS HEEYGVLDIS IKWPNDIYAN 180
181 GNQKIGGLVI NTTLQGSQAI VNIGSGINLN NSRPTVCIND LIREYNTRVP NNKLPILKYE 240
241 LLIAMIFNEI ERLLGEVQNG DFDSFYALYY SLWLHSGQSV KICLQKDQEK EAEIVGIDDF 300
301 GFLEVKLPTG TIEIVQPDGN SFDMLKGLII PKYQ
|
| Detection Method: | |
| Confidence: | 85.09691 |
| Match: | 1biaA |
| Description: | THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 4.025601351766 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 4.02412423650651 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 4.02412423650651 | bayes_pls_golite062009 |
| ligase activity | 3.51191116674556 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 0.685157827624735 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.66129822977065 | bayes_pls_golite062009 |
| binding | 0.521863822270226 | bayes_pls_golite062009 |
| transcription activator activity | 0.5042529875675 | bayes_pls_golite062009 |
| structural molecule activity | 0.272316540117209 | bayes_pls_golite062009 |
| ATP binding | 0.18403217430648 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.145955341735342 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 0.134313783036163 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 0.133891091298639 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.127823774098159 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0912115683429473 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 0.0218173339521677 | bayes_pls_golite062009 |
