| Protein: | sa-PA |
| Organism: | Drosophila melanogaster |
| Length: | 275 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sa-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
322.0 | [0..5] | [273..97] |
|
|
321.0 | [0..5] | [273..36] |
|
|
319.0 | [0..5] | [273..32] |
|
|
314.0 | [0..5] | [275..34] |
|
|
309.0 | [0..5] | [268..24] |
|
|
309.0 | [0..5] | [273..34] |
|
|
303.0 | [0..5] | [268..24] |
|
|
303.0 | [0..1] | [275..15] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MNTYDEVLAT VLDNLLASKN CEVVDDVLRQ SMLELLRGKF REIARQTTNW SNHAGRCAPS 60
61 YFDLERTFIR
|
| Detection Method: |  |
| Confidence: | 8.0 |
| Match: | 1tafA |
| Description: | TAF(II)42 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.83833760498314 | bayes_pls_golite062009 |
| DNA binding | 2.20605244773121 | bayes_pls_golite062009 |
| nucleic acid binding | 1.77431079461635 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.15400380806529 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.10286842697456 | bayes_pls_golite062009 |
| protein binding | 1.10166468462827 | bayes_pls_golite062009 |
| transcription regulator activity | 1.07001118921201 | bayes_pls_golite062009 |
| transcription factor activity | 0.77822926904752 | bayes_pls_golite062009 |
| transcription activator activity | 0.44852364509666 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.07646821147831 | bayes_pls_golite062009 |
|
Region A: Residues: [71-137] |
1 11 21 31 41 51
| | | | | |
1 MNIKVGELKA MYEGQPDSLV LVECNAPETQ DQDFHSVPQP VLSSTKAVEL ASTTYIPDHL 60
61 PPFPGAH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [138-275] |
1 11 21 31 41 51
| | | | | |
1 TYKSSTIEKV TDRSYVAMRN RHAENELNTQ NALNQYYLRC NPNISLFEET QRDGSGHVLD 60
61 LGPPKKLPYS DALMPRNQVF DTDIYAPIEV ITHKALDCRY LEKPKLHSSR PSSGNFEEED 120
121 VEMEEPCSPG GLGIEKPN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
