| Protein: | gnu-PA |
| Organism: | Drosophila melanogaster |
| Length: | 240 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gnu-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
185.0 | [0..1] | [240..1] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MERYNRVYRD PASPLTPLTP LSTEAFTFED VTPTGGVGRK GTARYGLFGM PKNNNLTVPN 60
61 SRPALSGLKR LSESTLPRRF SQKFMRTRSV FSPTSQSTLI NGETRLLGES GDSKLLRTKR 120
121 EDRPKPDIRL QQETRLRQEE SKLKSARKIK VEDP
|
| Detection Method: |  |
| Confidence: | 3.34 |
| Match: | 1v5lA |
| Description: | Solution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.13429174152905 | bayes_pls_golite062009 |
| protein binding | 2.17099732113956 | bayes_pls_golite062009 |
| transcription regulator activity | 1.93452329355776 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.354842441321404 | bayes_pls_golite062009 |
|
Region A: Residues: [155-240] |
1 11 21 31 41 51
| | | | | |
1 RSPTPSIHHS RYKPCSPVEH PTLSPRVKSL LDRTGNAHLT ELFTRQEIDI EVLIQMTLED 60
61 LAALGVRGAR EIRLAMNIIQ LAKQFF
|
| Detection Method: | |
| Confidence: | 11.455932 |
| Match: | PF07647.8 |
| Description: | No description for PF07647.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.924 | N/A | N/A | a.60.2 | RuvA domain 2-like |
