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View Structure Prediction Details

Protein: Sod-PA
Organism: Drosophila melanogaster
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sod-PA.

Description E-value Query
Range
Subject
Range
gi|5353561 - gi|5353561|gb|AAD42179.1| superoxide dismutase/HCV major epitope fusion protein [synthetic construct...
222.0 [0..1] [152..1]
SODC_DROOR - Superoxide dismutase [Cu-Zn] OS=Drosophila orena GN=Sod PE=3 SV=3
210.0 [0..1] [153..1]
SODC_DROVI - Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2
210.0 [0..1] [153..1]
SODC_DROYA - Superoxide dismutase [Cu-Zn] OS=Drosophila yakuba GN=Sod PE=3 SV=3
209.0 [0..1] [153..1]
gi|54640929, gi|... - gi|54640929|gb|EAL29680.1| GA11202-PA [Drosophila pseudoobscura], gi|125979823|ref|XP_001353944.1| G...
209.0 [0..2] [153..2]
SODC_DROTE - Superoxide dismutase [Cu-Zn] OS=Drosophila teissieri GN=Sod PE=3 SV=3
208.0 [0..1] [153..1]
gi|38564653 - gi|38564653|gb|AAR23787.1| SOD [Musca domestica]
208.0 [0..1] [153..1]
gi|8647 - gi|8647|emb|CAA35210.1| Cu-Zn superoxide dismutase [Drosophila melanogaster]
207.0 [0..1] [153..1]
SODC_CHYAM - Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2
207.0 [0..1] [153..1]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVKAVCVIN GDAKGTVFFE QESSGTPVKV SGEVCGLAKG LHGFHVHEFG DNTNGCMSSG  60
   61 PHFNPYGKEH GAPVDENRHL GDLGNIEATG DCPTKVNITD SKITLFGADS IIGRTVVVHA 120
  121 DADDLGQGGH ELSKSTGNAG ARIGCGVIGI AKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.045757
Match: 1n18A
Description: Cu,Zn superoxide dismutase, SOD
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein phosphatase 2B binding 13.5719110466797 bayes_pls_golite062009
superoxide dismutase activity 12.1093323949609 bayes_pls_golite062009
oxidoreductase activity, acting on superoxide radicals as acceptor 12.1093323949609 bayes_pls_golite062009
chaperone binding 5.11696266714142 bayes_pls_golite062009
superoxide dismutase copper chaperone activity 4.90125496493753 bayes_pls_golite062009
copper ion binding 4.51765925795625 bayes_pls_golite062009
protein phosphatase binding 3.26481550276071 bayes_pls_golite062009
phosphatase binding 3.1414149853516 bayes_pls_golite062009
transition metal ion binding 2.451533032488 bayes_pls_golite062009
binding 2.28211284921339 bayes_pls_golite062009
protein binding 1.96660745768497 bayes_pls_golite062009
enzyme binding 1.82618630359051 bayes_pls_golite062009
cation binding 1.79413011653575 bayes_pls_golite062009
metal ion binding 1.79413011653575 bayes_pls_golite062009
ion binding 1.78699219376941 bayes_pls_golite062009
catalytic activity 1.09233965765942 bayes_pls_golite062009
copper ion transmembrane transporter activity 0.658369569046781 bayes_pls_golite062009
metallochaperone activity 0.515959593535099 bayes_pls_golite062009
copper chaperone activity 0.412497194733789 bayes_pls_golite062009
ion transmembrane transporter activity 0.32642292951469 bayes_pls_golite062009
cation transmembrane transporter activity 0.262312399748454 bayes_pls_golite062009
zinc ion binding 0.25600715352161 bayes_pls_golite062009
antioxidant activity 0.240491838042064 bayes_pls_golite062009

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