| Protein: | PGRP-SD-PA |
| Organism: | Drosophila melanogaster |
| Length: | 186 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGRP-SD-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
213.0 | [0..1] | [184..1] |
|
|
206.0 | [0..1] | [186..383] |
|
|
202.0 | [0..18] | [184..175] |
|
|
201.0 | [0..1] | [184..341] |
|
|
200.0 | [0..1] | [186..502] |
|
|
199.0 | [0..1] | [186..211] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MTWIGLLIVG LTAIAVQGEV PIVTRAEWNA KPPNGAIDSM ETPLPRAVIA HTAGGACADD 60
61 VTCSQHMQNL QNFQMSKQKF SDIGYHYLIG GNGKVYEGRS PSQRGAFAGP NNDGSLGIAF 120
121 IGNFEERAPN KEALDAAKEL LEQAVKQAQL VEGYKLLGHR QVSATKSPGE ALYALIQQWP 180
181 NWSEEM
|
| Detection Method: |  |
| Confidence: | 48.69897 |
| Match: | 1s2jA |
| Description: | Crystal structure of the Drosophila pattern-recognition receptor PGRP-SA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidoglycan binding | 9.32313496679335 | bayes_pls_golite062009 |
| peptidoglycan receptor activity | 6.51660037886232 | bayes_pls_golite062009 |
| pattern recognition receptor activity | 6.45255811818702 | bayes_pls_golite062009 |
| N-acetylmuramoyl-L-alanine amidase activity | 5.29207604418857 | bayes_pls_golite062009 |
| pattern binding | 4.06455798515101 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.20235326428146 | bayes_pls_golite062009 |
| receptor activity | 2.69681086194598 | bayes_pls_golite062009 |
| signal transducer activity | 2.24692953747972 | bayes_pls_golite062009 |
| molecular transducer activity | 2.24692953747972 | bayes_pls_golite062009 |
| binding | 1.78736719382897 | bayes_pls_golite062009 |
| muramyl dipeptide binding | 1.16811676642278 | bayes_pls_golite062009 |
| hydrolase activity | 1.14017500144843 | bayes_pls_golite062009 |
| 0.808368163500401 | bayes_pls_golite062009 | |
| catalytic activity | 0.628556091191359 | bayes_pls_golite062009 |
| 0.60706691535931 | bayes_pls_golite062009 | |
| protein binding | 0.175384917086218 | bayes_pls_golite062009 |
