| Protein: | scramb2-PA |
| Organism: | Drosophila melanogaster |
| Length: | 263 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scramb2-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
372.0 | [0..9] | [263..70] |
|
|
364.0 | [0..4] | [262..30] |
|
|
358.0 | [0..22] | [263..82] |
|
|
357.0 | [0..4] | [262..36] |
|
|
357.0 | [0..4] | [262..43] |
|
Region A: Residues: [1-263] |
1 11 21 31 41 51
| | | | | |
1 MMQMSEYKVL PQNAPQDENG AVVLQPQAAN VGNNANGPEN WMSIPVGMPN CPQGLEYLTA 60
61 LDQLLVSQKI EKLELLTGFE TKNRFKVKNS LGQNVYFAYE ESDCCTRNML GRSRPFEMKI 120
121 LDNFQNEVLH LYRPFKCDIL CCFPSCMNAV EVSAPPGQVI GSVEQVCTFM RPKFNIKNTC 180
181 GDTVLQIEGP VCPCKCFSDT NFKVLSANNE EIGKISKQWS GLGRELFTDA DYFSVTFPLN 240
241 LDVRMKALIF AALFLIDAVY YEQ
|
| Detection Method: |  |
| Confidence: | 3.32 |
| Match: | 1zxuA |
| Description: | X-ray structure of protein from arabidopsis thaliana AT5G01750 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 1.40960604634475 | bayes_pls_golite062009 |
| molecular transducer activity | 1.40960604634475 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.20555655112374 | bayes_pls_golite062009 |
| receptor activity | 1.15270506651032 | bayes_pls_golite062009 |
| binding | 1.05855974212836 | bayes_pls_golite062009 |
| G-protein coupled photoreceptor activity | 0.94252200727689 | bayes_pls_golite062009 |
| protein binding | 0.6155304260359 | bayes_pls_golite062009 |
| photoreceptor activity | 0.504277760871571 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.450513229504489 | bayes_pls_golite062009 |
