| Protein: | gol-PB |
| Organism: | Drosophila melanogaster |
| Length: | 461 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gol-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
283.0 | [0..1] | [459..1] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MYIRKTLLLA CLVLLFGGLP PLTFPATTTT LVAAMSIANQ DLERYFRPGN GTHSFSGMED 60
61 RIAVDVYNYA FLNWSYVEHG NMLCNMEFAQ EQARYGEGKV LNVTGRLIHI TATDNFSDDY 120
121 ACTPYIRGTL GAPIPDKGET WIALVRRGRC TFEEKVKHVY QQN
|
| Detection Method: |  |
| Confidence: | 7.69897 |
| Match: | 1xf1A |
| Description: | Structure of C5a peptidase- a key virulence factor from Streptococcus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [164-356] |
1 11 21 31 41 51
| | | | | |
1 AAGVIIYNDK QVMQLEKMQI KGKTRNIAAV ITYQNIGQDL SLTLDKGYNV TISIIEGRRG 60
61 VRTISSLNRT SVLFVSISFI VLMIISLVWL IFYYIQRFRY MQAKDQQSRN LCSVTKKAIM 120
121 KIPTKTGKFS DEKDLDSDCC AICIEAYKPT DTIRILPCKH EFHKNCIDPW LIEHRTCPMC 180
181 KLDVLKFYGY VFL
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1fbvA |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.12724619324809 | bayes_pls_golite062009 |
| transcription regulator activity | 2.32209932468336 | bayes_pls_golite062009 |
| protein binding | 2.14586566310919 | bayes_pls_golite062009 |
| nucleic acid binding | 2.09146786953566 | bayes_pls_golite062009 |
| DNA binding | 1.92481088182068 | bayes_pls_golite062009 |
| transcription factor activity | 1.22542472051838 | bayes_pls_golite062009 |
| calcium ion binding | 0.9587727543737 | bayes_pls_golite062009 |
| molecular adaptor activity | 0.494024302340603 | bayes_pls_golite062009 |
| SH3/SH2 adaptor activity | 0.409062479526042 | bayes_pls_golite062009 |
| protein binding, bridging | 0.370788151516215 | bayes_pls_golite062009 |
| signal transducer activity | 0.150891693412241 | bayes_pls_golite062009 |
| molecular transducer activity | 0.150891693412241 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0128369896420697 | bayes_pls_golite062009 |
|
Region A: Residues: [357-461] |
1 11 21 31 41 51
| | | | | |
1 GSEESILEYQ PDPPQGLALV EARDESADLN RSRDFVVDFP RVFVLDSGCV VGAREMLFPC 60
61 RIPERSQSSL SLRQARDWVS LMSNKLEEQQ GLRSMRNDEM QQVIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
