| Protein: | CG5594-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1028 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5594-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
796.0 | [0..4] | [1028..76] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MQSNSAKDDS DEMEIIPSEH NGTVHETKNE DSGDIHRAEE NQKSSIDPNL YLYDDDLETR 60
61 PHISTFISSI ANYENTIPAA TDPDAKPAAP SAR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-193] |
1 11 21 31 41 51
| | | | | |
1 MGTLIGVFLP CIQNIFGVIL FIRLTWVVGT AGAVCGFLIV LTCCCVTMLT AISMSAIATN 60
61 GVVPAGGSYF MISRSLGPEF GGAVGMLFYT GTTLAAAMYI
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [194-716] |
1 11 21 31 41 51
| | | | | |
1 VGAVEIVLTY MAPWASIFGD FTKDADAMYN NFRVYGTLLL IFMGLIVFLG VKFVNKFATV 60
61 ALACVILSII AVYVGIFDNI HGNEKLYMCV LGKRLLKDIP LENCTKEDSF LRDIYCPDGK 120
121 CEEYYLANNV TKVKGIKGLA SGVFYDNIFP SFLEKGQFIS YGKSAIDIEN TSGESYNQIM 180
181 ADITTSFTLL IGIFFPSVTG IMAGSNRSGD LADAQKSIPI GTICAILTTS TVYLSSVMFF 240
241 AGTVDNLLLR DKFGQSIGGK LVVANIAWPN QWVILIGSFL STLGAGLQSL TGAPRLLQAI 300
301 ARDEIIPFLA PFAKSSKRGE PTRALLLTIV ICQCGILLGN VDLLAPLLSM FFLMCYGFVN 360
361 LACAVQTLLR TPNWRPRFKF YHWSLSLIGL TLCISVMIMT SWYFALIAMG MAIIIYKYIE 420
421 YRGAEKEWGD GIRGMALTAA RYSLLRLEEG PPHTKNWRPQ ILVLSKLNDN LLPKYRKIFS 480
481 FATQLKAGKG LTICVSVIKG DHTKITNKAV DAKATLRKYM TDE
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 1ar1A |
| Description: | Bacterial aa3 type cytochrome c oxidase subunit I |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| monovalent inorganic cation transmembrane transporter activity | 6.93719418697328 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 6.67949994760371 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 6.50939400533716 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 6.40081133240949 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 6.02701109829891 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.9695962563814 | bayes_pls_golite062009 |
| transporter activity | 4.2806100513341 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.19885907933483 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 4.09889747645813 | bayes_pls_golite062009 |
| binding | 1.32681091506724 | bayes_pls_golite062009 |
| heme-copper terminal oxidase activity | 1.27735515053931 | bayes_pls_golite062009 |
| copper ion binding | 1.08782819178001 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors | 0.803860393147327 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors, oxygen as acceptor | 0.803860393147327 | bayes_pls_golite062009 |
| cytochrome-c oxidase activity | 0.803860393147327 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.349031670056176 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.336122020727214 | bayes_pls_golite062009 |
| protein binding | 0.335149649581279 | bayes_pls_golite062009 |
|
Region A: Residues: [717-799] |
1 11 21 31 41 51
| | | | | |
1 KVKGFCDVLV AQQIGEGLSS VIQTIGLGGM KPNTVIIGWP YSWRQEGRNS WKTFIQTVRT 60
61 VAACHMALMV PKGINFYPES NHK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [800-941] |
1 11 21 31 41 51
| | | | | |
1 IGGNIDIWWI VHDGGLLMLL PFLLKQHRTW RNCKLRIFTV AQIEDNSIQM KKDLKTFLYH 60
61 LRIEADVEVV EMNNSDISAY TYERTLMMEQ RNQMLRALGL NKKENSKVDS QNDEKRNSID 120
121 LDGPENADTP ETTSNKDEST EK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [942-1028] |
1 11 21 31 41 51
| | | | | |
1 ADGDFKSSVK PDEFNVRRMH TAIKLNEVIV EKSQDAQLVI MNLPGPPREV RAERERNYME 60
61 FLEVLTEGLE KVLMVRGGGR EVITIYS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
