| Protein: | gbb-PA, FBpp0309939 |
| Organism: | Drosophila melanogaster |
| Length: | 455 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gbb-PA, FBpp0309939.
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..24] | [455..14] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MSGLRNTSEA VAVLASLGLG MVLLMFVATT PPAVEATQSG IYIDNGKDQT IMHRVLSEDD 60
61 KLDVSYEILE FLGIAERPTH LSSHQLSLRK SAPKFLLDVY HRITAEEGLS DQDEDDDYER 120
121 GHRSRRSADL EEDEGEQQKN FITDLDKRAI DES
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [154-304] |
1 11 21 31 41 51
| | | | | |
1 DIIMTFLNKR HHNVDELRHE HGRRLWFDVS NVPNDNYLVM AELRIYQNAN EGKWLTANRE 60
61 FTITVYAIGT GTLGQHTMEP LSSVNTTGDY VGWLELNVTE GLHEWLVKSK DNHGIYIGAH 120
121 AVNRPDREVK LDDIGLIHRK VDDEFQPFMI G
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [305-455] |
1 11 21 31 41 51
| | | | | |
1 FFRGPELIKA TAHSSHHRSK RSASHPRKRK KSVSPNNVPL LEPMESTRSC QMQTLYIDFK 60
61 DLGWHDWIIA PEGYGAFYCS GECNFPLNAH MNATNHAIVQ TLVHLLEPKK VPKPCCAPTR 120
121 LGALPVLYHL NDENVNLKKY RNMIVKSCGC H
|
| Detection Method: | |
| Confidence: | 41.0 |
| Match: | 1bmpA |
| Description: | BONE MORPHOGENETIC PROTEIN-7 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| type II transforming growth factor beta receptor binding | 6.0109591386237 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 1 binding | 5.35645409779291 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 4.8369569327215 | bayes_pls_golite062009 |
| receptor binding | 4.70889547404918 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 4.69128752159226 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 4.69128752159226 | bayes_pls_golite062009 |
| growth factor activity | 4.01406832911234 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 4.00406636948119 | bayes_pls_golite062009 |
| cytokine activity | 3.61376517935324 | bayes_pls_golite062009 |
| fibronectin binding | 3.5904111848601 | bayes_pls_golite062009 |
| protein binding | 3.41839891062651 | bayes_pls_golite062009 |
| growth factor binding | 3.23153419905493 | bayes_pls_golite062009 |
| cell surface binding | 2.9725198156666 | bayes_pls_golite062009 |
| binding | 2.85157432803513 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 2.76400237542695 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 2 binding | 2.68337714155403 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.49731836866959 | bayes_pls_golite062009 |
| glial cell line-derived neurotrophic factor receptor binding | 2.42595321135263 | bayes_pls_golite062009 |
| heparin binding | 2.11784489374422 | bayes_pls_golite062009 |
| hormone activity | 2.10500409590202 | bayes_pls_golite062009 |
| platelet-derived growth factor binding | 2.01091405432331 | bayes_pls_golite062009 |
| protein dimerization activity | 1.82426827198541 | bayes_pls_golite062009 |
| collagen binding | 1.64555624988816 | bayes_pls_golite062009 |
| transcription regulator activity | 1.57604808199471 | bayes_pls_golite062009 |
| signal transducer activity | 1.40678896068326 | bayes_pls_golite062009 |
| molecular transducer activity | 1.40678896068326 | bayes_pls_golite062009 |
| protein homodimerization activity | 1.377005150119 | bayes_pls_golite062009 |
| identical protein binding | 1.18858126900765 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.1841101716474 | bayes_pls_golite062009 |
| polysaccharide binding | 1.16191864095271 | bayes_pls_golite062009 |
| kinase activity | 1.15484804727089 | bayes_pls_golite062009 |
| protein kinase activity | 1.13177677975696 | bayes_pls_golite062009 |
| cytokine binding | 1.11655568277071 | bayes_pls_golite062009 |
| transcription repressor activity | 1.07701076060466 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.01600179397846 | bayes_pls_golite062009 |
| transcription activator activity | 1.00293277340817 | bayes_pls_golite062009 |
| SMAD binding | 0.918765103972039 | bayes_pls_golite062009 |
| morphogen activity | 0.91146826241391 | bayes_pls_golite062009 |
| pattern binding | 0.90497366619649 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.88308874209284 | bayes_pls_golite062009 |
| neurotrophin receptor binding | 0.81172494974121 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.675252100191059 | bayes_pls_golite062009 |
| transforming growth factor beta binding | 0.539891088283499 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 3 binding | 0.385087890820529 | bayes_pls_golite062009 |
| catalytic activity | 0.105223830172599 | bayes_pls_golite062009 |
| follicle-stimulating hormone activity | 0.0768613588095315 | bayes_pls_golite062009 |
| carbohydrate binding | 0.0235054088545197 | bayes_pls_golite062009 |
