| Protein: | qkr58E-1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 396 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for qkr58E-1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
308.0 | [0..1] | [396..1] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MPRDYDRDYN EDAADYKRKR RDEEPAATGA PETPEADGGG HTTSHAALRD TPQLNEKTNA 60
61 YLQECLLEKK TLEKKHIITK RLLDDEVEKI LVSG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-263] |
1 11 21 31 41 51
| | | | | |
1 RIPKPEIYAN VYSEKPIRVA QKVLFPIKEY PKFNFVGKIL GPKGNTLRQL QEETMCKMVV 60
61 MGRNSMRDHG KEEELRSSGN PKYAHLSRDL HVEISTVAPP AEAYHRISYA LGEIRKFMIP 120
121 DANDDIRLEQ LREMDGKERM YKKSHHYSKS YGDHGAYSSR TPPPASSKP
|
| Detection Method: | |
| Confidence: | 46.522879 |
| Match: | 2bl5A |
| Description: | Solution structure of the KH-QUA2 region of the Xenopus STAR-GSG Quaking protein. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.766407798661875 | bayes_pls_golite062009 |
| nucleic acid binding | 0.1608635436815 | bayes_pls_golite062009 |
| RNA binding | 0.0205643208063799 | bayes_pls_golite062009 |
|
Region A: Residues: [264-396] |
1 11 21 31 41 51
| | | | | |
1 KVYSILEKAR YVMDDPNYGI VKTHRSRDHE LYDHHGEYDR YATPPPQTSK HSTHHAQYDS 60
61 SSYERDYRRE YHPHSSSSSY AAAYPAKPSN GRSSSSYRPT TSGSGSHSSA HYETGSRSRE 120
121 SVRYRSAPYP KIR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
