Protein: | qkr58E-1-PA |
Organism: | Drosophila melanogaster |
Length: | 396 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for qkr58E-1-PA.
Description | E-value | Query Range |
Subject Range |
|
308.0 | [0..1] | [396..1] |
Region A: Residues: [1-94] |
1 11 21 31 41 51 | | | | | | 1 MPRDYDRDYN EDAADYKRKR RDEEPAATGA PETPEADGGG HTTSHAALRD TPQLNEKTNA 60 61 YLQECLLEKK TLEKKHIITK RLLDDEVEKI LVSG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [95-263] |
1 11 21 31 41 51 | | | | | | 1 RIPKPEIYAN VYSEKPIRVA QKVLFPIKEY PKFNFVGKIL GPKGNTLRQL QEETMCKMVV 60 61 MGRNSMRDHG KEEELRSSGN PKYAHLSRDL HVEISTVAPP AEAYHRISYA LGEIRKFMIP 120 121 DANDDIRLEQ LREMDGKERM YKKSHHYSKS YGDHGAYSSR TPPPASSKP |
Detection Method: | |
Confidence: | 46.522879 |
Match: | 2bl5A |
Description: | Solution structure of the KH-QUA2 region of the Xenopus STAR-GSG Quaking protein. |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.766407798661875 | bayes_pls_golite062009 |
nucleic acid binding | 0.1608635436815 | bayes_pls_golite062009 |
RNA binding | 0.0205643208063799 | bayes_pls_golite062009 |
Region A: Residues: [264-396] |
1 11 21 31 41 51 | | | | | | 1 KVYSILEKAR YVMDDPNYGI VKTHRSRDHE LYDHHGEYDR YATPPPQTSK HSTHHAQYDS 60 61 SSYERDYRRE YHPHSSSSSY AAAYPAKPSN GRSSSSYRPT TSGSGSHSSA HYETGSRSRE 120 121 SVRYRSAPYP KIR |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.