YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG4372-PA
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4372-PA.

Description E-value Query
Range
Subject
Range
FBpp0308484 - type=protein; loc=2R:join(5476655..5476767,5476821..5477889); ID=FBpp0308484; name=CG1827-PD; parent...
gi|220944558, gi... - gi|220954428|gb|ACL89757.1| CG1827-PB [synthetic construct], gi|220944558|gb|ACL84822.1| CG1827-PB [...
421.0 [0..7] [378..13]

Back

Predicted Domain #1
Region A:
Residues: [1-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAQSCCLRL LILLLLFTTI GSVPKKSLKY FTNRKLRERR IKLFGTKKTE IQSLLISTWN  60
   61 YTDANLQAWS VLQQGPRRTR QAVIQGCMAC QNQRCGRLLT GRSSPDTEGA LTLEAAIMDG 120
  121 ESLEYGAVAG MNGVRNAILV ADAVLKYTKH SVLVGKSATK FARSLGYKEE YLTDARTRNV 180
  181 LKKWRSNGCQ PNFWRDVHPS PAENCGPYSP LPEHMHQHPM HQEYAIIQGQ HDQLAFLALD 240
  241 AEGKFHVASQ SSGAQFRIPG RVGDSAVPGA GIYADNEVGG AVASGDGDVL MRHLPAFLAV 300
  301 EAMRAGKEPD KAAELVVQRL LRHNTEFNGA VVVVNRRGIY AAACAGLDEF HFVVSGGKEY 360
  361 LSMARVERVK CLERENEVID GGPKGLFPTI PEKHKVP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.045757
Match: 1p4kA
Description: Glycosylasparaginase (aspartylglucosaminidase, AGA)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 3.38733168359688 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 3.03788973144293 bayes_pls_golite062009
endopeptidase activity 2.9540890713795 bayes_pls_golite062009
hydrolase activity 2.94435862073675 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
nucleic acid binding 0.378514472331937 bayes_pls_golite062009
binding 0.159226414314936 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle