| Protein: | Syn2-PE |
| Organism: | Drosophila melanogaster |
| Length: | 519 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Syn2-PE.
| Description | E-value | Query Range |
Subject Range |
|
|
425.0 | [0..6] | [519..1] |
|
Region A: Residues: [1-295] |
1 11 21 31 41 51
| | | | | |
1 MISGIMKLSD TMATPIEEKL DQNLKVRTGM VHVSDGKSRP EPLRLNLTME LLSLQKLEVV 60
61 TPSSCHPNGP PMESKERMVQ ITRQKQGGLG LSIKGGAEHK LPILISRIYK DQAADITGQL 120
121 FVGDAIIKVN GEYITACPHD DAVNILRNAG DIVVLTVKHY RAATPFLQKQ LTKDTPDSDN 180
181 DVTCAELKAD EGYKSSVNSG TISRSCSRPM SICSEPEKRW TDVVAVPLMM AYVTRYIYGT 240
241 DKLRQNAFEV RGLNGISTGV IHCDELAILS QWLKLITDNV VGLTHLQMKL YNRNF
|
| Detection Method: |  |
| Confidence: | 28.39794 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [296-434] |
1 11 21 31 41 51
| | | | | |
1 AVGERIEYMG WVNEGVINNN ISWQSYKPRF LLLKGTEVML FETPPLNVAG ISKALVVYKV 60
61 YQTMFRIVKE SETVDSRQHC FLLQSSGHEP RYLSVETRQE LLRIENSWNA AIVTSVIKLG 120
121 RKTFAVSHHG KSGGLTLDW
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1jxmA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [435-519] |
1 11 21 31 41 51
| | | | | |
1 QAGFSLTEGA ESATVWQYKF SQLRGSSDDG KSKLKLHFQD HDSRAIETKE LECQVLQSLL 60
61 FCMHAFLTAK VASVDPAFLS SIQQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
