| Protein: | Syn2-PA, Syn2-PB |
| Organism: | Drosophila melanogaster |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Syn2-PA, Syn2-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
485.0 | [0..1] | [514..6] |
|
Region A: Residues: [1-280] |
1 11 21 31 41 51
| | | | | |
1 MKLSDTMATP IEEKLDQNLK VRTGMVHVSD GKSRPEPLRL NLTMELLSLQ KLEVVTPSSC 60
61 HPNGPPMESK ERMVQITRQK QGGLGLSIKG GAEHKLPILI SRIYKDQAAD ITGQLFVGDA 120
121 IIKVNGEYIT ACPHDDAVNI LRNAGDIVVL TVKHYRAATP FLQKQLTKDT PDSDNDVTCA 180
181 ELKADEGYKS SVNSGTISRS CSRPMSICSE PEKRWTDVVA VPLMMAYVTR YIYGTDKLRQ 240
241 NAFEVRGLNG ISTGVIHCDE LAILSQWLKL ITDNVVGLTH
|
| Detection Method: |  |
| Confidence: | 30.0 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [281-418] |
1 11 21 31 41 51
| | | | | |
1 LQMKLYNRNF AVGERIEYMG WVNEGVINNN ISWQSYKPRF LLLKGTEVML FETPPLNVAG 60
61 ISKALVVYKV YQTMFRIVKE SETVDSRQHC FLLQSSGHEP RYLSVETRQE LLRIENSWNA 120
121 AIVTSVIKLG RKTFAVSH
|
| Detection Method: | |
| Confidence: | 14.522879 |
| Match: | 1kjwA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [419-514] |
1 11 21 31 41 51
| | | | | |
1 HGKSGGLTLD WQAGFSLTEG AESATVWQYK FSQLRGSSDD GKSKLKLHFQ DHDSRAIETK 60
61 ELECQVLQSL LFCMHAFLTA KVASVDPAFL SSIQQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
