| Protein: | gi|7302983, gi|2... |
| Organism: | Drosophila melanogaster |
| Length: | 1173 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7302983, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
488.0 | [0..236] | [1081..57] |
|
Region A: Residues: [1-645] |
1 11 21 31 41 51
| | | | | |
1 MSWSRRRRRN NNNNNNSSSN NNNAASESRS NDNCNYSTTN DFNKINKLLL ITYMLLITAA 60
61 TICQSAAQSP SSSNGNGVGG SGSTGGSPLS ALLKSGGASY NQQLPQQQLF AMLTRNGGGS 120
121 SGPRSSGGNR GYTSARQHFM ALSEDYSDAD VDEEDMAALH YPLSASHPPA GVQGSSSSSG 180
181 ISIQSGSLET NGFVADDGGQ YEHAQKALEA AAAAAKASNK YNIDCPKDCK CLNVLFDCDK 240
241 LHLERVPVLP SYVQTLHLAN NKLNDTTVLE IRNLLNLTKV SLKRNLLEVI PKFIGLSGLK 300
301 HLVLANNHIT SISSESLAAL PLLRTLDLSR NKLHTIELNS FPKSNNLVHL ILSFNEITNV 360
361 NEHSFATLNN LTDLELSNNR LSTLPIRVFK NLNQLKKLAL NFNQLEINWS TFRGLESMKN 420
421 LQLKSNKIRA LQDGVFYVMH KIETIDLAMN QISSLSRQGL FNLTKLRHLN LSFNAISRIE 480
481 VDTWEFTQSL EVLDLSNNAI NEFKPQHLDC LHRLKTLNLA HNRLQYLQEN TFDCVKNLEE 540
541 LNLRRNRLSW IIEDQSAAAP FKGLRKLRRL DLHGNNLKQI STKAMSGLNN LEILNLGSNA 600
601 LASIQVNAFE HMLRLNKLVF KSLNFICDCD LVWFQQWLKN RFPQQ
|
| Detection Method: |  |
| Confidence: | 54.0 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [646-791] |
1 11 21 31 41 51
| | | | | |
1 AEHAVCGYPE HLLDRHLKSL SSSELVCVDS PKPRVEQEPD DMLAVNAANI TLECIASSPT 60
61 AASLAAADEL KIKWRHDNQH VQERPAVHDG ASTETQIRHD LSTNQTSIYG YLRLTNVTYE 120
121 SAGRYQCVVS NAFGTTYAQK FKISIG
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 2gy5A |
| Description: | No description for 2gy5A was found. |
|
Region A: Residues: [792-1173] |
1 11 21 31 41 51
| | | | | |
1 IHPTFLQVPS NLTLDAGEMA RLVCSASGDP TPEIALQKFG GSEFPAATER RLQVIREENA 60
61 FLITNAKPSD SGIYTCTALS AAGEIKVNAT LVVNDKPQPS IPLVHQEVVV GRTCVLQCLS 120
121 ETANADFELE HPHREWFKEN KPIHISPTAP DGDQLVVVKE NLNWVVLLVG IITVTVICVV 180
181 VDCCIIWCTL RYQKKKLRMS LAAERHSTQL RPRSLADLGC SYDEANHRRL TVMSTPPSEQ 240
241 RCLEQGLTLS YLRQTDLEAQ QDHLSSKDSG TGSDAAVKRT LDDFEVAMPS HKHHTDDEEE 300
301 EEVEEVYEEN EPPYIKHTYE VNYAEPEQHL FLQNNNHNYD GGGIGVAGGV NKMVPNALLR 360
361 KCSAGASGSN YSSIQQCTTV DI
|
| Detection Method: | |
| Confidence: | 41.221849 |
| Match: | 1cs6A |
| Description: | Axonin-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.17641566810715 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 2.79767000113033 | bayes_pls_golite062009 |
| receptor activity | 2.05639524829249 | bayes_pls_golite062009 |
| molecular transducer activity | 1.80932022663119 | bayes_pls_golite062009 |
| signal transducer activity | 1.80932022663119 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 1.68957060156689 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.65953142725335 | bayes_pls_golite062009 |
| antigen binding | 1.45942243170397 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 1.39941520479711 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 1.39405837847039 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.36789541796983 | bayes_pls_golite062009 |
| protein binding | 1.17809977833322 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 0.940492274094239 | bayes_pls_golite062009 |
| receptor binding | 0.838643016003073 | bayes_pls_golite062009 |
| nucleic acid binding | 0.518011841154552 | bayes_pls_golite062009 |
| integrin binding | 0.32413307774101 | bayes_pls_golite062009 |
| transcription regulator activity | 0.316848380982695 | bayes_pls_golite062009 |
| DNA binding | 0.304320681250924 | bayes_pls_golite062009 |
| protein kinase activity | 0.274138794214258 | bayes_pls_golite062009 |
| carbohydrate binding | 0.0389714345254086 | bayes_pls_golite062009 |
