| Protein: | scb-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1115 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scb-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
851.0 | [0..1] | [1115..1] |
|
Region A: Residues: [1-1115] |
1 11 21 31 41 51
| | | | | |
1 MNAESTMFPH IFLALLALIS HIEAFNFMPR PSRVINSPKH LKFHINQTRS SYFGYTLVIR 60
61 QTSIIVGAPR AQSTLESQRT INETGAIYRC SLTNGVCSPY VLDSRGNVDA PYSEYTFDSE 120
121 RKDFQWLGGS MDGGTKDTDK LLVCAPRFYA PSSRDNHLHG VCYWVNNTVA STPQHVTRIS 180
181 PLRLKSEQVK EEDNGNKASF FYIMGELGLS AHVADDNTKF LIGAPGINTW RGSVILYRQV 240
241 DPVDNPTASR RDTSKALRRT YRDVDSNDYT PEHYAPEIPT PGLWGQEEDS YFGYAVSSGF 300
301 FDSSNPTKLL YVATAPQANK QSGEAYIFDV RGKSIHKYHV FRGEQFGEYF GYSVLAEDLN 360
361 GDGKTDVIVS APQHALEDSH DNGAIYVFIN KGFFNFERQI LRSPVETMAR FGTALSRLGD 420
421 INHDGYNDVA VGAPFAGNGT VFIYLGSENG LRDQPSQRLD APSQQPSKYG SHMFGHGLSR 480
481 GSDIDGNGFN DFAIGAPNAE AVYLYRAYPV VKVHATVKSE SREIKPEQEK VKITACYRLS 540
541 TTSTDKLVQE QELAIRIAMD KQLKRVKFTQ TQTNEISFKV NANFGEQCRD FETQVRYSEK 600
601 DIFTPIDLEM HYELTKKVPD SEEFCETCAI VDPTEPKVST QNIIFSTGCA TDVCTADLQL 660
661 RSKDVSPTYI LGSADTLRLN YEITNIGETA YLPQFNVTST SRLAFAQVPG NCKVVDAVMV 720
721 CDLNRGRPLA KGDTDSVTIS FDVSQLSGQS LIIHAEVFST GYEQNPTDNR QTNVIGLKEF 780
781 TEIDASGGQT NSQIDLEHYS NSAEIVNNYE IKSNGPSVIE QLTVSFYIPI AYKVAGSTAI 840
841 IPIINVTSLK MQASYDSQLL SIDLYDQNNT MLVVDPVEVT TTLSGGLERT VITQNRQSYD 900
901 IHTSGHVHQT MEVLDTSMVA TASMSRKRRD LKALTANREQ YARISNVKAH DLLSDDFKGK 960
961 LPVNRTIVFN CRDPEMTICV RAEMRVHFRP EKSINLNMRY SVDLNEVNAI LVDPWEYFVI1020
1021 LTDLKLQKKG DPTSTSFSIN RRIEPNIISK HQETGLPIWI IIVSVIGGLL LLSAISYLLY1080
1081 KFGFFNRTKK DELDRLVQQN PVEPEAENLN SGGNN
|
| Detection Method: |  |
| Confidence: | 173.0 |
| Match: | 1jv2A |
| Description: | Thigh, calf-1 and calf-2 domains of integrin alpha; Integrin alpha N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cell adhesion molecule binding | 4.38909417354069 | bayes_pls_golite062009 |
| receptor activity | 3.07436728891089 | bayes_pls_golite062009 |
| protein binding | 2.93314130654223 | bayes_pls_golite062009 |
| binding | 2.38505574840555 | bayes_pls_golite062009 |
| signal transducer activity | 2.30570215634503 | bayes_pls_golite062009 |
| molecular transducer activity | 2.30570215634503 | bayes_pls_golite062009 |
| extracellular matrix binding | 2.29992000538847 | bayes_pls_golite062009 |
| fibronectin binding | 2.1460818503023 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.89652634417708 | bayes_pls_golite062009 |
| integrin binding | 1.46467851042106 | bayes_pls_golite062009 |
| laminin receptor activity | 0.57752974249266 | bayes_pls_golite062009 |
| protein complex binding | 0.317709418149211 | bayes_pls_golite062009 |
| receptor binding | 0.272415627526009 | bayes_pls_golite062009 |
| laminin binding | 0.0766626920324303 | bayes_pls_golite062009 |
